Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19885 | 59878;59879;59880 | chr2:178592251;178592250;178592249 | chr2:179456978;179456977;179456976 |
N2AB | 18244 | 54955;54956;54957 | chr2:178592251;178592250;178592249 | chr2:179456978;179456977;179456976 |
N2A | 17317 | 52174;52175;52176 | chr2:178592251;178592250;178592249 | chr2:179456978;179456977;179456976 |
N2B | 10820 | 32683;32684;32685 | chr2:178592251;178592250;178592249 | chr2:179456978;179456977;179456976 |
Novex-1 | 10945 | 33058;33059;33060 | chr2:178592251;178592250;178592249 | chr2:179456978;179456977;179456976 |
Novex-2 | 11012 | 33259;33260;33261 | chr2:178592251;178592250;178592249 | chr2:179456978;179456977;179456976 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs777362856 | 0.57 | 0.002 | N | 0.152 | 0.137 | 0.191931220699 | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.6E-05 | None | 4.68E-05 | 0 | 0 |
E/K | rs777362856 | 0.57 | 0.002 | N | 0.152 | 0.137 | 0.191931220699 | gnomAD-4.0.0 | 5.4811E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73792E-04 | 0 | 8.14143E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1061 | likely_benign | 0.1081 | benign | -0.445 | Destabilizing | 0.139 | N | 0.315 | neutral | N | 0.446061343 | None | None | N |
E/C | 0.6043 | likely_pathogenic | 0.6133 | pathogenic | 0.042 | Stabilizing | 0.995 | D | 0.458 | neutral | None | None | None | None | N |
E/D | 0.1622 | likely_benign | 0.1728 | benign | -0.465 | Destabilizing | 0.425 | N | 0.273 | neutral | N | 0.45835585 | None | None | N |
E/F | 0.5305 | ambiguous | 0.5401 | ambiguous | -0.288 | Destabilizing | 0.893 | D | 0.545 | neutral | None | None | None | None | N |
E/G | 0.1957 | likely_benign | 0.2038 | benign | -0.676 | Destabilizing | 0.425 | N | 0.363 | neutral | N | 0.484022298 | None | None | N |
E/H | 0.2534 | likely_benign | 0.2741 | benign | -0.222 | Destabilizing | 0.944 | D | 0.421 | neutral | None | None | None | None | N |
E/I | 0.1653 | likely_benign | 0.1604 | benign | 0.141 | Stabilizing | 0.543 | D | 0.403 | neutral | None | None | None | None | N |
E/K | 0.1027 | likely_benign | 0.114 | benign | 0.369 | Stabilizing | 0.002 | N | 0.152 | neutral | N | 0.409060393 | None | None | N |
E/L | 0.206 | likely_benign | 0.2084 | benign | 0.141 | Stabilizing | 0.003 | N | 0.381 | neutral | None | None | None | None | N |
E/M | 0.2608 | likely_benign | 0.2575 | benign | 0.341 | Stabilizing | 0.893 | D | 0.499 | neutral | None | None | None | None | N |
E/N | 0.2076 | likely_benign | 0.2116 | benign | -0.034 | Destabilizing | 0.704 | D | 0.278 | neutral | None | None | None | None | N |
E/P | 0.913 | likely_pathogenic | 0.9296 | pathogenic | -0.034 | Destabilizing | 0.828 | D | 0.489 | neutral | None | None | None | None | N |
E/Q | 0.084 | likely_benign | 0.0896 | benign | 0.018 | Stabilizing | 0.01 | N | 0.135 | neutral | N | 0.425453997 | None | None | N |
E/R | 0.1547 | likely_benign | 0.1805 | benign | 0.512 | Stabilizing | 0.003 | N | 0.147 | neutral | None | None | None | None | N |
E/S | 0.1562 | likely_benign | 0.1621 | benign | -0.188 | Destabilizing | 0.495 | N | 0.274 | neutral | None | None | None | None | N |
E/T | 0.1198 | likely_benign | 0.118 | benign | 0.006 | Stabilizing | 0.495 | N | 0.32 | neutral | None | None | None | None | N |
E/V | 0.1035 | likely_benign | 0.1025 | benign | -0.034 | Destabilizing | 0.002 | N | 0.319 | neutral | N | 0.433228119 | None | None | N |
E/W | 0.7742 | likely_pathogenic | 0.7983 | pathogenic | -0.111 | Destabilizing | 0.995 | D | 0.476 | neutral | None | None | None | None | N |
E/Y | 0.4435 | ambiguous | 0.4532 | ambiguous | -0.027 | Destabilizing | 0.944 | D | 0.58 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.