Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19897 | 59914;59915;59916 | chr2:178592215;178592214;178592213 | chr2:179456942;179456941;179456940 |
N2AB | 18256 | 54991;54992;54993 | chr2:178592215;178592214;178592213 | chr2:179456942;179456941;179456940 |
N2A | 17329 | 52210;52211;52212 | chr2:178592215;178592214;178592213 | chr2:179456942;179456941;179456940 |
N2B | 10832 | 32719;32720;32721 | chr2:178592215;178592214;178592213 | chr2:179456942;179456941;179456940 |
Novex-1 | 10957 | 33094;33095;33096 | chr2:178592215;178592214;178592213 | chr2:179456942;179456941;179456940 |
Novex-2 | 11024 | 33295;33296;33297 | chr2:178592215;178592214;178592213 | chr2:179456942;179456941;179456940 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.994 | N | 0.629 | 0.435 | 0.516827169674 | gnomAD-4.0.0 | 3.19186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.87439E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1143 | likely_benign | 0.1292 | benign | -1.05 | Destabilizing | 0.835 | D | 0.405 | neutral | N | 0.485177092 | None | None | N |
T/C | 0.4042 | ambiguous | 0.4407 | ambiguous | -0.487 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/D | 0.631 | likely_pathogenic | 0.6624 | pathogenic | -0.922 | Destabilizing | 0.97 | D | 0.562 | neutral | None | None | None | None | N |
T/E | 0.4964 | ambiguous | 0.5304 | ambiguous | -0.736 | Destabilizing | 0.97 | D | 0.548 | neutral | None | None | None | None | N |
T/F | 0.2851 | likely_benign | 0.2988 | benign | -0.708 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
T/G | 0.3316 | likely_benign | 0.3659 | ambiguous | -1.443 | Destabilizing | 0.97 | D | 0.515 | neutral | None | None | None | None | N |
T/H | 0.2337 | likely_benign | 0.2627 | benign | -1.482 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/I | 0.2019 | likely_benign | 0.2207 | benign | -0.02 | Destabilizing | 0.994 | D | 0.628 | neutral | N | 0.477119684 | None | None | N |
T/K | 0.2338 | likely_benign | 0.273 | benign | -0.213 | Destabilizing | 0.97 | D | 0.557 | neutral | None | None | None | None | N |
T/L | 0.114 | likely_benign | 0.1237 | benign | -0.02 | Destabilizing | 0.985 | D | 0.485 | neutral | None | None | None | None | N |
T/M | 0.0967 | likely_benign | 0.1004 | benign | -0.109 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/N | 0.154 | likely_benign | 0.1651 | benign | -0.75 | Destabilizing | 0.961 | D | 0.525 | neutral | N | 0.503416136 | None | None | N |
T/P | 0.782 | likely_pathogenic | 0.8373 | pathogenic | -0.333 | Destabilizing | 0.994 | D | 0.629 | neutral | N | 0.50361773 | None | None | N |
T/Q | 0.2174 | likely_benign | 0.2471 | benign | -0.563 | Destabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/R | 0.2065 | likely_benign | 0.2423 | benign | -0.42 | Destabilizing | 0.996 | D | 0.662 | neutral | None | None | None | None | N |
T/S | 0.1184 | likely_benign | 0.1258 | benign | -1.025 | Destabilizing | 0.287 | N | 0.281 | neutral | N | 0.395301662 | None | None | N |
T/V | 0.1656 | likely_benign | 0.1779 | benign | -0.333 | Destabilizing | 0.985 | D | 0.456 | neutral | None | None | None | None | N |
T/W | 0.6661 | likely_pathogenic | 0.6789 | pathogenic | -0.829 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
T/Y | 0.3341 | likely_benign | 0.3557 | ambiguous | -0.446 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.