Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19899 | 59920;59921;59922 | chr2:178592209;178592208;178592207 | chr2:179456936;179456935;179456934 |
N2AB | 18258 | 54997;54998;54999 | chr2:178592209;178592208;178592207 | chr2:179456936;179456935;179456934 |
N2A | 17331 | 52216;52217;52218 | chr2:178592209;178592208;178592207 | chr2:179456936;179456935;179456934 |
N2B | 10834 | 32725;32726;32727 | chr2:178592209;178592208;178592207 | chr2:179456936;179456935;179456934 |
Novex-1 | 10959 | 33100;33101;33102 | chr2:178592209;178592208;178592207 | chr2:179456936;179456935;179456934 |
Novex-2 | 11026 | 33301;33302;33303 | chr2:178592209;178592208;178592207 | chr2:179456936;179456935;179456934 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1450922913 | None | 0.969 | N | 0.523 | 0.335 | 0.294206760003 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1450922913 | None | 0.969 | N | 0.523 | 0.335 | 0.294206760003 | gnomAD-4.0.0 | 3.10186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.24073E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4428 | ambiguous | 0.4861 | ambiguous | -0.408 | Destabilizing | 0.953 | D | 0.595 | neutral | None | None | None | None | N |
K/C | 0.7325 | likely_pathogenic | 0.754 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
K/D | 0.629 | likely_pathogenic | 0.6813 | pathogenic | -0.159 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
K/E | 0.2164 | likely_benign | 0.236 | benign | -0.08 | Destabilizing | 0.969 | D | 0.523 | neutral | N | 0.474920026 | None | None | N |
K/F | 0.8976 | likely_pathogenic | 0.9032 | pathogenic | -0.11 | Destabilizing | 0.986 | D | 0.78 | deleterious | None | None | None | None | N |
K/G | 0.5295 | ambiguous | 0.57 | pathogenic | -0.75 | Destabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/H | 0.3793 | ambiguous | 0.3928 | ambiguous | -1.082 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
K/I | 0.5959 | likely_pathogenic | 0.6046 | pathogenic | 0.464 | Stabilizing | 0.964 | D | 0.771 | deleterious | N | 0.470282829 | None | None | N |
K/L | 0.5231 | ambiguous | 0.5254 | ambiguous | 0.464 | Stabilizing | 0.778 | D | 0.585 | neutral | None | None | None | None | N |
K/M | 0.3451 | ambiguous | 0.3488 | ambiguous | 0.338 | Stabilizing | 0.807 | D | 0.415 | neutral | None | None | None | None | N |
K/N | 0.482 | ambiguous | 0.5056 | ambiguous | -0.306 | Destabilizing | 0.997 | D | 0.658 | neutral | N | 0.488678757 | None | None | N |
K/P | 0.9682 | likely_pathogenic | 0.9761 | pathogenic | 0.204 | Stabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
K/Q | 0.1425 | likely_benign | 0.1473 | benign | -0.426 | Destabilizing | 0.991 | D | 0.635 | neutral | N | 0.493719217 | None | None | N |
K/R | 0.0875 | likely_benign | 0.0917 | benign | -0.579 | Destabilizing | 0.969 | D | 0.532 | neutral | N | 0.518924306 | None | None | N |
K/S | 0.481 | ambiguous | 0.521 | ambiguous | -0.894 | Destabilizing | 0.976 | D | 0.585 | neutral | None | None | None | None | N |
K/T | 0.2663 | likely_benign | 0.2958 | benign | -0.628 | Destabilizing | 0.982 | D | 0.743 | deleterious | N | 0.491697632 | None | None | N |
K/V | 0.5056 | ambiguous | 0.5237 | ambiguous | 0.204 | Stabilizing | 0.91 | D | 0.662 | neutral | None | None | None | None | N |
K/W | 0.8533 | likely_pathogenic | 0.8598 | pathogenic | 0.001 | Stabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
K/Y | 0.7806 | likely_pathogenic | 0.7923 | pathogenic | 0.264 | Stabilizing | 0.993 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.