Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19900 | 59923;59924;59925 | chr2:178592206;178592205;178592204 | chr2:179456933;179456932;179456931 |
N2AB | 18259 | 55000;55001;55002 | chr2:178592206;178592205;178592204 | chr2:179456933;179456932;179456931 |
N2A | 17332 | 52219;52220;52221 | chr2:178592206;178592205;178592204 | chr2:179456933;179456932;179456931 |
N2B | 10835 | 32728;32729;32730 | chr2:178592206;178592205;178592204 | chr2:179456933;179456932;179456931 |
Novex-1 | 10960 | 33103;33104;33105 | chr2:178592206;178592205;178592204 | chr2:179456933;179456932;179456931 |
Novex-2 | 11027 | 33304;33305;33306 | chr2:178592206;178592205;178592204 | chr2:179456933;179456932;179456931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1559600496 | None | 0.054 | N | 0.176 | 0.043 | 0.1749357433 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.04E-06 | 0 |
E/D | rs1559600496 | None | 0.054 | N | 0.176 | 0.043 | 0.1749357433 | gnomAD-4.0.0 | 1.59508E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41779E-04 | 0 | 0 | 0 |
E/G | rs2050365298 | None | 0.978 | N | 0.593 | 0.416 | 0.361558571881 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs2050365298 | None | 0.978 | N | 0.593 | 0.416 | 0.361558571881 | gnomAD-4.0.0 | 2.56759E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1688 | likely_benign | 0.1895 | benign | -0.207 | Destabilizing | 0.989 | D | 0.547 | neutral | N | 0.402865139 | None | None | N |
E/C | 0.8931 | likely_pathogenic | 0.9079 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/D | 0.108 | likely_benign | 0.1189 | benign | -1.259 | Destabilizing | 0.054 | N | 0.176 | neutral | N | 0.451507235 | None | None | N |
E/F | 0.8599 | likely_pathogenic | 0.8829 | pathogenic | 0.625 | Stabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
E/G | 0.2692 | likely_benign | 0.3147 | benign | -0.594 | Destabilizing | 0.978 | D | 0.593 | neutral | N | 0.462030873 | None | None | N |
E/H | 0.7181 | likely_pathogenic | 0.7586 | pathogenic | 0.594 | Stabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
E/I | 0.4804 | ambiguous | 0.5393 | ambiguous | 0.847 | Stabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.3597 | ambiguous | 0.4214 | ambiguous | -0.322 | Destabilizing | 0.978 | D | 0.466 | neutral | N | 0.432516043 | None | None | N |
E/L | 0.4846 | ambiguous | 0.5358 | ambiguous | 0.847 | Stabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/M | 0.5709 | likely_pathogenic | 0.5972 | pathogenic | 0.948 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/N | 0.3461 | ambiguous | 0.4002 | ambiguous | -1.035 | Destabilizing | 0.983 | D | 0.509 | neutral | None | None | None | None | N |
E/P | 0.3275 | likely_benign | 0.3645 | ambiguous | 0.518 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Q | 0.2473 | likely_benign | 0.2698 | benign | -0.825 | Destabilizing | 0.989 | D | 0.519 | neutral | N | 0.462030873 | None | None | N |
E/R | 0.5525 | ambiguous | 0.6177 | pathogenic | 0.078 | Stabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
E/S | 0.2807 | likely_benign | 0.3275 | benign | -1.281 | Destabilizing | 0.983 | D | 0.461 | neutral | None | None | None | None | N |
E/T | 0.3434 | ambiguous | 0.3859 | ambiguous | -0.937 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | N |
E/V | 0.2995 | likely_benign | 0.3344 | benign | 0.518 | Stabilizing | 0.999 | D | 0.675 | neutral | N | 0.480443276 | None | None | N |
E/W | 0.959 | likely_pathogenic | 0.9703 | pathogenic | 0.83 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/Y | 0.7351 | likely_pathogenic | 0.7762 | pathogenic | 0.887 | Stabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.