Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19911 | 59956;59957;59958 | chr2:178592173;178592172;178592171 | chr2:179456900;179456899;179456898 |
N2AB | 18270 | 55033;55034;55035 | chr2:178592173;178592172;178592171 | chr2:179456900;179456899;179456898 |
N2A | 17343 | 52252;52253;52254 | chr2:178592173;178592172;178592171 | chr2:179456900;179456899;179456898 |
N2B | 10846 | 32761;32762;32763 | chr2:178592173;178592172;178592171 | chr2:179456900;179456899;179456898 |
Novex-1 | 10971 | 33136;33137;33138 | chr2:178592173;178592172;178592171 | chr2:179456900;179456899;179456898 |
Novex-2 | 11038 | 33337;33338;33339 | chr2:178592173;178592172;178592171 | chr2:179456900;179456899;179456898 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 1.0 | N | 0.675 | 0.377 | 0.329282125956 | gnomAD-4.0.0 | 6.84614E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99706E-07 | 0 | 0 |
N/S | None | None | 0.999 | N | 0.538 | 0.351 | 0.312608672186 | gnomAD-4.0.0 | 1.36922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99693E-07 | 0 | 1.65815E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4934 | ambiguous | 0.4957 | ambiguous | -0.7 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
N/C | 0.4309 | ambiguous | 0.4051 | ambiguous | -0.541 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
N/D | 0.3961 | ambiguous | 0.3989 | ambiguous | -2.19 | Highly Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.514382491 | None | None | N |
N/E | 0.8378 | likely_pathogenic | 0.8523 | pathogenic | -2.024 | Highly Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
N/F | 0.8449 | likely_pathogenic | 0.8629 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
N/G | 0.3565 | ambiguous | 0.3474 | ambiguous | -1.019 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
N/H | 0.1342 | likely_benign | 0.1274 | benign | -0.784 | Destabilizing | 1.0 | D | 0.675 | neutral | N | 0.449467008 | None | None | N |
N/I | 0.8763 | likely_pathogenic | 0.9057 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.93 | deleterious | N | 0.474357752 | None | None | N |
N/K | 0.7863 | likely_pathogenic | 0.8069 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.656 | neutral | N | 0.498719605 | None | None | N |
N/L | 0.7592 | likely_pathogenic | 0.7945 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
N/M | 0.8123 | likely_pathogenic | 0.8383 | pathogenic | 0.362 | Stabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
N/P | 0.9921 | likely_pathogenic | 0.9933 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
N/Q | 0.652 | likely_pathogenic | 0.6604 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
N/R | 0.6932 | likely_pathogenic | 0.7143 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
N/S | 0.0967 | likely_benign | 0.0935 | benign | -1.084 | Destabilizing | 0.999 | D | 0.538 | neutral | N | 0.44134617 | None | None | N |
N/T | 0.4111 | ambiguous | 0.4419 | ambiguous | -0.76 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.514209133 | None | None | N |
N/V | 0.8032 | likely_pathogenic | 0.8464 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
N/W | 0.9296 | likely_pathogenic | 0.9338 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
N/Y | 0.4033 | ambiguous | 0.4237 | ambiguous | -0.206 | Destabilizing | 1.0 | D | 0.912 | deleterious | N | 0.468824344 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.