Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19916 | 59971;59972;59973 | chr2:178592158;178592157;178592156 | chr2:179456885;179456884;179456883 |
N2AB | 18275 | 55048;55049;55050 | chr2:178592158;178592157;178592156 | chr2:179456885;179456884;179456883 |
N2A | 17348 | 52267;52268;52269 | chr2:178592158;178592157;178592156 | chr2:179456885;179456884;179456883 |
N2B | 10851 | 32776;32777;32778 | chr2:178592158;178592157;178592156 | chr2:179456885;179456884;179456883 |
Novex-1 | 10976 | 33151;33152;33153 | chr2:178592158;178592157;178592156 | chr2:179456885;179456884;179456883 |
Novex-2 | 11043 | 33352;33353;33354 | chr2:178592158;178592157;178592156 | chr2:179456885;179456884;179456883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.002 | N | 0.262 | 0.136 | 0.222439326576 | gnomAD-4.0.0 | 6.84568E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99679E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6479 | likely_pathogenic | 0.748 | pathogenic | -2.21 | Highly Destabilizing | 0.688 | D | 0.539 | neutral | None | None | None | None | N |
R/C | 0.2109 | likely_benign | 0.246 | benign | -2.049 | Highly Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
R/D | 0.9508 | likely_pathogenic | 0.9716 | pathogenic | -1.306 | Destabilizing | 0.842 | D | 0.64 | neutral | None | None | None | None | N |
R/E | 0.6371 | likely_pathogenic | 0.743 | pathogenic | -1.047 | Destabilizing | 0.525 | D | 0.557 | neutral | None | None | None | None | N |
R/F | 0.6758 | likely_pathogenic | 0.765 | pathogenic | -1.254 | Destabilizing | 0.991 | D | 0.687 | prob.neutral | None | None | None | None | N |
R/G | 0.5785 | likely_pathogenic | 0.6764 | pathogenic | -2.599 | Highly Destabilizing | 0.801 | D | 0.6 | neutral | N | 0.478521581 | None | None | N |
R/H | 0.1896 | likely_benign | 0.2243 | benign | -1.943 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | N |
R/I | 0.3617 | ambiguous | 0.4655 | ambiguous | -1.059 | Destabilizing | 0.974 | D | 0.673 | neutral | None | None | None | None | N |
R/K | 0.087 | likely_benign | 0.0959 | benign | -1.128 | Destabilizing | 0.002 | N | 0.262 | neutral | N | 0.412871489 | None | None | N |
R/L | 0.342 | ambiguous | 0.4479 | ambiguous | -1.059 | Destabilizing | 0.842 | D | 0.6 | neutral | None | None | None | None | N |
R/M | 0.3444 | ambiguous | 0.4376 | ambiguous | -1.509 | Destabilizing | 0.989 | D | 0.638 | neutral | N | 0.498412961 | None | None | N |
R/N | 0.8661 | likely_pathogenic | 0.915 | pathogenic | -1.618 | Destabilizing | 0.842 | D | 0.569 | neutral | None | None | None | None | N |
R/P | 0.9826 | likely_pathogenic | 0.9873 | pathogenic | -1.434 | Destabilizing | 0.974 | D | 0.649 | neutral | None | None | None | None | N |
R/Q | 0.1439 | likely_benign | 0.1677 | benign | -1.429 | Destabilizing | 0.842 | D | 0.609 | neutral | None | None | None | None | N |
R/S | 0.7705 | likely_pathogenic | 0.8436 | pathogenic | -2.57 | Highly Destabilizing | 0.801 | D | 0.58 | neutral | N | 0.465012455 | None | None | N |
R/T | 0.5159 | ambiguous | 0.6321 | pathogenic | -2.065 | Highly Destabilizing | 0.801 | D | 0.551 | neutral | N | 0.466151318 | None | None | N |
R/V | 0.4623 | ambiguous | 0.5539 | ambiguous | -1.434 | Destabilizing | 0.974 | D | 0.66 | neutral | None | None | None | None | N |
R/W | 0.3038 | likely_benign | 0.378 | ambiguous | -0.67 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | N | 0.468251232 | None | None | N |
R/Y | 0.512 | ambiguous | 0.6036 | pathogenic | -0.619 | Destabilizing | 0.991 | D | 0.666 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.