Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19917 | 59974;59975;59976 | chr2:178592155;178592154;178592153 | chr2:179456882;179456881;179456880 |
N2AB | 18276 | 55051;55052;55053 | chr2:178592155;178592154;178592153 | chr2:179456882;179456881;179456880 |
N2A | 17349 | 52270;52271;52272 | chr2:178592155;178592154;178592153 | chr2:179456882;179456881;179456880 |
N2B | 10852 | 32779;32780;32781 | chr2:178592155;178592154;178592153 | chr2:179456882;179456881;179456880 |
Novex-1 | 10977 | 33154;33155;33156 | chr2:178592155;178592154;178592153 | chr2:179456882;179456881;179456880 |
Novex-2 | 11044 | 33355;33356;33357 | chr2:178592155;178592154;178592153 | chr2:179456882;179456881;179456880 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.117 | D | 0.467 | 0.162 | 0.215869574891 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.704 | likely_pathogenic | 0.6782 | pathogenic | -2.046 | Highly Destabilizing | 0.035 | N | 0.455 | neutral | None | None | None | None | N |
R/C | 0.2559 | likely_benign | 0.2286 | benign | -1.961 | Destabilizing | 0.935 | D | 0.64 | neutral | None | None | None | None | N |
R/D | 0.9596 | likely_pathogenic | 0.9563 | pathogenic | -0.848 | Destabilizing | 0.149 | N | 0.573 | neutral | None | None | None | None | N |
R/E | 0.6728 | likely_pathogenic | 0.6595 | pathogenic | -0.657 | Destabilizing | 0.035 | N | 0.471 | neutral | None | None | None | None | N |
R/F | 0.7461 | likely_pathogenic | 0.7425 | pathogenic | -1.477 | Destabilizing | 0.791 | D | 0.624 | neutral | None | None | None | None | N |
R/G | 0.5829 | likely_pathogenic | 0.5694 | pathogenic | -2.362 | Highly Destabilizing | 0.117 | N | 0.513 | neutral | N | 0.47325857 | None | None | N |
R/H | 0.2207 | likely_benign | 0.2148 | benign | -2.268 | Highly Destabilizing | 0.555 | D | 0.447 | neutral | None | None | None | None | N |
R/I | 0.6089 | likely_pathogenic | 0.5887 | pathogenic | -1.137 | Destabilizing | 0.484 | N | 0.625 | neutral | N | 0.47300508 | None | None | N |
R/K | 0.0735 | likely_benign | 0.0658 | benign | -1.424 | Destabilizing | None | N | 0.151 | neutral | N | 0.405214798 | None | None | N |
R/L | 0.3926 | ambiguous | 0.352 | ambiguous | -1.137 | Destabilizing | 0.149 | N | 0.513 | neutral | None | None | None | None | N |
R/M | 0.3662 | ambiguous | 0.3446 | ambiguous | -1.578 | Destabilizing | 0.791 | D | 0.535 | neutral | None | None | None | None | N |
R/N | 0.8546 | likely_pathogenic | 0.8446 | pathogenic | -1.193 | Destabilizing | 0.149 | N | 0.438 | neutral | None | None | None | None | N |
R/P | 0.9838 | likely_pathogenic | 0.9828 | pathogenic | -1.429 | Destabilizing | 0.555 | D | 0.589 | neutral | None | None | None | None | N |
R/Q | 0.1443 | likely_benign | 0.1429 | benign | -1.189 | Destabilizing | 0.081 | N | 0.464 | neutral | None | None | None | None | N |
R/S | 0.8192 | likely_pathogenic | 0.8083 | pathogenic | -2.158 | Highly Destabilizing | 0.062 | N | 0.453 | neutral | N | 0.490678912 | None | None | N |
R/T | 0.6818 | likely_pathogenic | 0.6738 | pathogenic | -1.768 | Destabilizing | 0.117 | N | 0.467 | neutral | D | 0.526082352 | None | None | N |
R/V | 0.6846 | likely_pathogenic | 0.642 | pathogenic | -1.429 | Destabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
R/W | 0.3719 | ambiguous | 0.3936 | ambiguous | -0.973 | Destabilizing | 0.935 | D | 0.673 | neutral | None | None | None | None | N |
R/Y | 0.6049 | likely_pathogenic | 0.6168 | pathogenic | -0.807 | Destabilizing | 0.555 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.