Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19920 | 59983;59984;59985 | chr2:178592146;178592145;178592144 | chr2:179456873;179456872;179456871 |
N2AB | 18279 | 55060;55061;55062 | chr2:178592146;178592145;178592144 | chr2:179456873;179456872;179456871 |
N2A | 17352 | 52279;52280;52281 | chr2:178592146;178592145;178592144 | chr2:179456873;179456872;179456871 |
N2B | 10855 | 32788;32789;32790 | chr2:178592146;178592145;178592144 | chr2:179456873;179456872;179456871 |
Novex-1 | 10980 | 33163;33164;33165 | chr2:178592146;178592145;178592144 | chr2:179456873;179456872;179456871 |
Novex-2 | 11047 | 33364;33365;33366 | chr2:178592146;178592145;178592144 | chr2:179456873;179456872;179456871 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.998 | N | 0.511 | 0.351 | 0.453679287548 | gnomAD-4.0.0 | 1.59311E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79065E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.458 | ambiguous | 0.4197 | ambiguous | -0.908 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
A/D | 0.2893 | likely_benign | 0.2559 | benign | -0.553 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.451021659 | None | None | N |
A/E | 0.2856 | likely_benign | 0.2757 | benign | -0.703 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
A/F | 0.3471 | ambiguous | 0.3129 | benign | -0.929 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/G | 0.1344 | likely_benign | 0.1173 | benign | -0.28 | Destabilizing | 0.996 | D | 0.433 | neutral | N | 0.393858867 | None | None | N |
A/H | 0.4277 | ambiguous | 0.4145 | ambiguous | -0.215 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
A/I | 0.2524 | likely_benign | 0.2227 | benign | -0.452 | Destabilizing | 1.0 | D | 0.59 | neutral | None | None | None | None | N |
A/K | 0.4647 | ambiguous | 0.4443 | ambiguous | -0.587 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
A/L | 0.1684 | likely_benign | 0.1557 | benign | -0.452 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | N |
A/M | 0.2361 | likely_benign | 0.2147 | benign | -0.582 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
A/N | 0.2023 | likely_benign | 0.1821 | benign | -0.338 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
A/P | 0.3346 | likely_benign | 0.246 | benign | -0.368 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.495354013 | None | None | N |
A/Q | 0.3099 | likely_benign | 0.3129 | benign | -0.6 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
A/R | 0.4122 | ambiguous | 0.4062 | ambiguous | -0.129 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
A/S | 0.0881 | likely_benign | 0.0823 | benign | -0.528 | Destabilizing | 0.957 | D | 0.343 | neutral | N | 0.449176219 | None | None | N |
A/T | 0.0848 | likely_benign | 0.0788 | benign | -0.604 | Destabilizing | 0.992 | D | 0.489 | neutral | N | 0.444135759 | None | None | N |
A/V | 0.1364 | likely_benign | 0.1228 | benign | -0.368 | Destabilizing | 0.998 | D | 0.511 | neutral | N | 0.482174072 | None | None | N |
A/W | 0.7493 | likely_pathogenic | 0.7209 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/Y | 0.4813 | ambiguous | 0.441 | ambiguous | -0.712 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.