Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19925 | 59998;59999;60000 | chr2:178592131;178592130;178592129 | chr2:179456858;179456857;179456856 |
N2AB | 18284 | 55075;55076;55077 | chr2:178592131;178592130;178592129 | chr2:179456858;179456857;179456856 |
N2A | 17357 | 52294;52295;52296 | chr2:178592131;178592130;178592129 | chr2:179456858;179456857;179456856 |
N2B | 10860 | 32803;32804;32805 | chr2:178592131;178592130;178592129 | chr2:179456858;179456857;179456856 |
Novex-1 | 10985 | 33178;33179;33180 | chr2:178592131;178592130;178592129 | chr2:179456858;179456857;179456856 |
Novex-2 | 11052 | 33379;33380;33381 | chr2:178592131;178592130;178592129 | chr2:179456858;179456857;179456856 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs2050346497 | None | None | N | 0.153 | 0.233 | 0.521653710555 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/L | rs2050346497 | None | None | N | 0.153 | 0.233 | 0.521653710555 | gnomAD-4.0.0 | 6.58354E-06 | None | None | None | None | I | None | 2.41721E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0759 | likely_benign | 0.0737 | benign | -0.655 | Destabilizing | 0.021 | N | 0.163 | neutral | N | 0.435862992 | None | None | I |
S/C | 0.082 | likely_benign | 0.0784 | benign | -0.439 | Destabilizing | 0.94 | D | 0.321 | neutral | None | None | None | None | I |
S/D | 0.3756 | ambiguous | 0.3737 | ambiguous | 0.198 | Stabilizing | 0.816 | D | 0.233 | neutral | None | None | None | None | I |
S/E | 0.3342 | likely_benign | 0.3807 | ambiguous | 0.199 | Stabilizing | 0.593 | D | 0.219 | neutral | None | None | None | None | I |
S/F | 0.1015 | likely_benign | 0.1038 | benign | -0.808 | Destabilizing | 0.264 | N | 0.325 | neutral | None | None | None | None | I |
S/G | 0.1173 | likely_benign | 0.0999 | benign | -0.897 | Destabilizing | 0.375 | N | 0.233 | neutral | None | None | None | None | I |
S/H | 0.1721 | likely_benign | 0.1943 | benign | -1.205 | Destabilizing | 0.94 | D | 0.318 | neutral | None | None | None | None | I |
S/I | 0.0699 | likely_benign | 0.0635 | benign | -0.12 | Destabilizing | None | N | 0.154 | neutral | None | None | None | None | I |
S/K | 0.3832 | ambiguous | 0.4553 | ambiguous | -0.513 | Destabilizing | 0.593 | D | 0.223 | neutral | None | None | None | None | I |
S/L | 0.0585 | likely_benign | 0.0599 | benign | -0.12 | Destabilizing | None | N | 0.153 | neutral | N | 0.42408856 | None | None | I |
S/M | 0.1019 | likely_benign | 0.0949 | benign | -0.062 | Destabilizing | 0.716 | D | 0.382 | neutral | None | None | None | None | I |
S/N | 0.0983 | likely_benign | 0.092 | benign | -0.483 | Destabilizing | 0.816 | D | 0.267 | neutral | None | None | None | None | I |
S/P | 0.6613 | likely_pathogenic | 0.7373 | pathogenic | -0.264 | Destabilizing | 0.77 | D | 0.331 | neutral | N | 0.50280006 | None | None | I |
S/Q | 0.2463 | likely_benign | 0.29 | benign | -0.578 | Destabilizing | 0.94 | D | 0.34 | neutral | None | None | None | None | I |
S/R | 0.3666 | ambiguous | 0.4225 | ambiguous | -0.402 | Destabilizing | 0.593 | D | 0.385 | neutral | None | None | None | None | I |
S/T | 0.0632 | likely_benign | 0.06 | benign | -0.54 | Destabilizing | 0.183 | N | 0.256 | neutral | N | 0.382433939 | None | None | I |
S/V | 0.08 | likely_benign | 0.0704 | benign | -0.264 | Destabilizing | None | N | 0.153 | neutral | None | None | None | None | I |
S/W | 0.2158 | likely_benign | 0.2333 | benign | -0.795 | Destabilizing | 0.983 | D | 0.389 | neutral | None | None | None | None | I |
S/Y | 0.104 | likely_benign | 0.111 | benign | -0.518 | Destabilizing | 0.593 | D | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.