Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19934 | 60025;60026;60027 | chr2:178592104;178592103;178592102 | chr2:179456831;179456830;179456829 |
N2AB | 18293 | 55102;55103;55104 | chr2:178592104;178592103;178592102 | chr2:179456831;179456830;179456829 |
N2A | 17366 | 52321;52322;52323 | chr2:178592104;178592103;178592102 | chr2:179456831;179456830;179456829 |
N2B | 10869 | 32830;32831;32832 | chr2:178592104;178592103;178592102 | chr2:179456831;179456830;179456829 |
Novex-1 | 10994 | 33205;33206;33207 | chr2:178592104;178592103;178592102 | chr2:179456831;179456830;179456829 |
Novex-2 | 11061 | 33406;33407;33408 | chr2:178592104;178592103;178592102 | chr2:179456831;179456830;179456829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1363638353 | -0.792 | 0.642 | N | 0.425 | 0.139 | 0.183819452728 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/N | rs1363638353 | -0.792 | 0.642 | N | 0.425 | 0.139 | 0.183819452728 | gnomAD-4.0.0 | 3.18587E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72014E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4231 | ambiguous | 0.4201 | ambiguous | -0.847 | Destabilizing | 0.495 | N | 0.463 | neutral | None | None | None | None | N |
K/C | 0.5759 | likely_pathogenic | 0.5457 | ambiguous | -0.802 | Destabilizing | 0.995 | D | 0.551 | neutral | None | None | None | None | N |
K/D | 0.7509 | likely_pathogenic | 0.7748 | pathogenic | -0.391 | Destabilizing | 0.828 | D | 0.547 | neutral | None | None | None | None | N |
K/E | 0.3529 | ambiguous | 0.3788 | ambiguous | -0.211 | Destabilizing | 0.425 | N | 0.451 | neutral | N | 0.416658369 | None | None | N |
K/F | 0.7928 | likely_pathogenic | 0.7699 | pathogenic | -0.408 | Destabilizing | 0.893 | D | 0.587 | neutral | None | None | None | None | N |
K/G | 0.5344 | ambiguous | 0.5435 | ambiguous | -1.228 | Destabilizing | 0.828 | D | 0.549 | neutral | None | None | None | None | N |
K/H | 0.332 | likely_benign | 0.3291 | benign | -1.142 | Destabilizing | 0.007 | N | 0.419 | neutral | None | None | None | None | N |
K/I | 0.4138 | ambiguous | 0.4048 | ambiguous | 0.171 | Stabilizing | 0.543 | D | 0.583 | neutral | None | None | None | None | N |
K/L | 0.2961 | likely_benign | 0.277 | benign | 0.171 | Stabilizing | 0.003 | N | 0.414 | neutral | None | None | None | None | N |
K/M | 0.2215 | likely_benign | 0.2256 | benign | -0.203 | Destabilizing | 0.863 | D | 0.566 | neutral | N | 0.446634559 | None | None | N |
K/N | 0.4559 | ambiguous | 0.4861 | ambiguous | -0.801 | Destabilizing | 0.642 | D | 0.425 | neutral | N | 0.408942963 | None | None | N |
K/P | 0.5614 | ambiguous | 0.5316 | ambiguous | -0.142 | Destabilizing | 0.981 | D | 0.607 | neutral | None | None | None | None | N |
K/Q | 0.1656 | likely_benign | 0.1668 | benign | -0.691 | Destabilizing | 0.642 | D | 0.418 | neutral | N | 0.443228895 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0822 | benign | -0.375 | Destabilizing | 0.001 | N | 0.256 | neutral | N | 0.373232879 | None | None | N |
K/S | 0.547 | ambiguous | 0.5627 | ambiguous | -1.41 | Destabilizing | 0.495 | N | 0.411 | neutral | None | None | None | None | N |
K/T | 0.1782 | likely_benign | 0.1998 | benign | -1.008 | Destabilizing | 0.784 | D | 0.503 | neutral | N | 0.321742479 | None | None | N |
K/V | 0.3768 | ambiguous | 0.3597 | ambiguous | -0.142 | Destabilizing | 0.543 | D | 0.545 | neutral | None | None | None | None | N |
K/W | 0.7927 | likely_pathogenic | 0.7426 | pathogenic | -0.348 | Destabilizing | 0.995 | D | 0.567 | neutral | None | None | None | None | N |
K/Y | 0.5927 | likely_pathogenic | 0.5779 | pathogenic | -0.062 | Destabilizing | 0.893 | D | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.