Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1993860037;60038;60039 chr2:178592092;178592091;178592090chr2:179456819;179456818;179456817
N2AB1829755114;55115;55116 chr2:178592092;178592091;178592090chr2:179456819;179456818;179456817
N2A1737052333;52334;52335 chr2:178592092;178592091;178592090chr2:179456819;179456818;179456817
N2B1087332842;32843;32844 chr2:178592092;178592091;178592090chr2:179456819;179456818;179456817
Novex-11099833217;33218;33219 chr2:178592092;178592091;178592090chr2:179456819;179456818;179456817
Novex-21106533418;33419;33420 chr2:178592092;178592091;178592090chr2:179456819;179456818;179456817
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: A
  • RefSeq wild type transcript codon: GCT
  • RefSeq wild type template codon: CGA
  • Domain: Fn3-32
  • Domain position: 62
  • Structural Position: 93
  • Q(SASA): 0.1553
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
A/T rs755204306 -1.166 1.0 N 0.697 0.268 0.46614307118 gnomAD-2.1.1 8.07E-06 None None None None N None 0 0 None 0 0 None 3.27E-05 None 0 8.92E-06 0
A/T rs755204306 -1.166 1.0 N 0.697 0.268 0.46614307118 gnomAD-3.1.2 1.32E-05 None None None None N None 0 0 0 0 0 None 0 0 2.94E-05 0 0
A/T rs755204306 -1.166 1.0 N 0.697 0.268 0.46614307118 Sasaki (2020) None Other comp het with A9980T, R29293C None None N Genetic analysis of 2 siblings with asymmetric facial and limb weakness; variant prioritisation; no validation None None None None None None None None None None None
A/T rs755204306 -1.166 1.0 N 0.697 0.268 0.46614307118 gnomAD-4.0.0 3.59616E-05 None None None None N None 1.33568E-05 0 None 0 3.58568E-04 None 0 0 2.54347E-05 8.78677E-05 4.80708E-05
A/V rs1187337182 0.677 0.992 N 0.639 0.354 None gnomAD-2.1.1 1.43E-05 None None None None N None 0 0 None 0 0 None 0 None 0 3.14E-05 0
A/V rs1187337182 0.677 0.992 N 0.639 0.354 None gnomAD-3.1.2 4.61E-05 None None None None N None 2.41E-05 0 0 0 0 None 0 0 8.83E-05 0 0
A/V rs1187337182 0.677 0.992 N 0.639 0.354 None gnomAD-4.0.0 7.25416E-05 None None None None N None 2.67115E-05 0 None 0 0 None 0 0 9.58025E-05 0 3.20451E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
A/C 0.4009 ambiguous 0.3985 ambiguous -0.427 Destabilizing 1.0 D 0.768 deleterious None None None None N
A/D 0.9322 likely_pathogenic 0.9599 pathogenic -2.171 Highly Destabilizing 1.0 D 0.837 deleterious N 0.496180732 None None N
A/E 0.8581 likely_pathogenic 0.9117 pathogenic -1.901 Destabilizing 1.0 D 0.804 deleterious None None None None N
A/F 0.5768 likely_pathogenic 0.6203 pathogenic -0.49 Destabilizing 0.999 D 0.839 deleterious None None None None N
A/G 0.3079 likely_benign 0.3251 benign -1.244 Destabilizing 0.999 D 0.656 neutral N 0.493739 None None N
A/H 0.8909 likely_pathogenic 0.9242 pathogenic -1.951 Destabilizing 1.0 D 0.863 deleterious None None None None N
A/I 0.2631 likely_benign 0.2641 benign 0.737 Stabilizing 0.994 D 0.743 deleterious None None None None N
A/K 0.9477 likely_pathogenic 0.967 pathogenic -0.77 Destabilizing 1.0 D 0.8 deleterious None None None None N
A/L 0.2375 likely_benign 0.2579 benign 0.737 Stabilizing 0.504 D 0.457 neutral None None None None N
A/M 0.4273 ambiguous 0.453 ambiguous 0.539 Stabilizing 0.999 D 0.825 deleterious None None None None N
A/N 0.8479 likely_pathogenic 0.8854 pathogenic -1.264 Destabilizing 1.0 D 0.838 deleterious None None None None N
A/P 0.7636 likely_pathogenic 0.7953 pathogenic 0.295 Stabilizing 1.0 D 0.812 deleterious D 0.523097975 None None N
A/Q 0.8138 likely_pathogenic 0.8625 pathogenic -0.932 Destabilizing 1.0 D 0.806 deleterious None None None None N
A/R 0.901 likely_pathogenic 0.9348 pathogenic -1.154 Destabilizing 1.0 D 0.813 deleterious None None None None N
A/S 0.22 likely_benign 0.2324 benign -1.611 Destabilizing 1.0 D 0.646 neutral N 0.470354826 None None N
A/T 0.1964 likely_benign 0.177 benign -1.199 Destabilizing 1.0 D 0.697 prob.neutral N 0.511707545 None None N
A/V 0.1306 likely_benign 0.1283 benign 0.295 Stabilizing 0.992 D 0.639 neutral N 0.383639086 None None N
A/W 0.9191 likely_pathogenic 0.9445 pathogenic -1.416 Destabilizing 1.0 D 0.854 deleterious None None None None N
A/Y 0.7935 likely_pathogenic 0.8413 pathogenic -0.716 Destabilizing 1.0 D 0.857 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.