Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19940 | 60043;60044;60045 | chr2:178592086;178592085;178592084 | chr2:179456813;179456812;179456811 |
N2AB | 18299 | 55120;55121;55122 | chr2:178592086;178592085;178592084 | chr2:179456813;179456812;179456811 |
N2A | 17372 | 52339;52340;52341 | chr2:178592086;178592085;178592084 | chr2:179456813;179456812;179456811 |
N2B | 10875 | 32848;32849;32850 | chr2:178592086;178592085;178592084 | chr2:179456813;179456812;179456811 |
Novex-1 | 11000 | 33223;33224;33225 | chr2:178592086;178592085;178592084 | chr2:179456813;179456812;179456811 |
Novex-2 | 11067 | 33424;33425;33426 | chr2:178592086;178592085;178592084 | chr2:179456813;179456812;179456811 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.995 | N | 0.461 | 0.185 | 0.262662153117 | gnomAD-4.0.0 | 5.47618E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29764E-06 | 0 | 1.65777E-05 |
H/Y | rs192279089 | 0.99 | 0.026 | N | 0.181 | 0.137 | 0.1749357433 | gnomAD-2.1.1 | 7.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
H/Y | rs192279089 | 0.99 | 0.026 | N | 0.181 | 0.137 | 0.1749357433 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Y | rs192279089 | 0.99 | 0.026 | N | 0.181 | 0.137 | 0.1749357433 | gnomAD-4.0.0 | 8.06018E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.10216E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2491 | likely_benign | 0.2522 | benign | 0.399 | Stabilizing | 0.919 | D | 0.449 | neutral | None | None | None | None | N |
H/C | 0.2003 | likely_benign | 0.186 | benign | 0.649 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
H/D | 0.1881 | likely_benign | 0.2133 | benign | -0.034 | Destabilizing | 0.995 | D | 0.475 | neutral | N | 0.400069976 | None | None | N |
H/E | 0.3269 | likely_benign | 0.341 | ambiguous | -0.029 | Destabilizing | 0.959 | D | 0.436 | neutral | None | None | None | None | N |
H/F | 0.1608 | likely_benign | 0.149 | benign | 0.908 | Stabilizing | 0.952 | D | 0.456 | neutral | None | None | None | None | N |
H/G | 0.2104 | likely_benign | 0.2217 | benign | 0.165 | Stabilizing | 0.959 | D | 0.46 | neutral | None | None | None | None | N |
H/I | 0.297 | likely_benign | 0.2794 | benign | 0.975 | Stabilizing | 0.976 | D | 0.599 | neutral | None | None | None | None | N |
H/K | 0.3033 | likely_benign | 0.3429 | ambiguous | 0.347 | Stabilizing | 0.988 | D | 0.455 | neutral | None | None | None | None | N |
H/L | 0.1308 | likely_benign | 0.1236 | benign | 0.975 | Stabilizing | 0.811 | D | 0.52 | neutral | N | 0.465818468 | None | None | N |
H/M | 0.3614 | ambiguous | 0.3531 | ambiguous | 0.706 | Stabilizing | 0.999 | D | 0.55 | neutral | None | None | None | None | N |
H/N | 0.0692 | likely_benign | 0.0734 | benign | 0.302 | Stabilizing | 0.946 | D | 0.465 | neutral | N | 0.377635834 | None | None | N |
H/P | 0.279 | likely_benign | 0.2696 | benign | 0.808 | Stabilizing | 0.995 | D | 0.545 | neutral | N | 0.480400416 | None | None | N |
H/Q | 0.1944 | likely_benign | 0.2007 | benign | 0.357 | Stabilizing | 0.995 | D | 0.461 | neutral | N | 0.480227058 | None | None | N |
H/R | 0.175 | likely_benign | 0.1923 | benign | -0.126 | Destabilizing | 0.984 | D | 0.464 | neutral | N | 0.433185259 | None | None | N |
H/S | 0.1901 | likely_benign | 0.1937 | benign | 0.387 | Stabilizing | 0.959 | D | 0.449 | neutral | None | None | None | None | N |
H/T | 0.2276 | likely_benign | 0.2288 | benign | 0.486 | Stabilizing | 0.988 | D | 0.492 | neutral | None | None | None | None | N |
H/V | 0.2476 | likely_benign | 0.2379 | benign | 0.808 | Stabilizing | 0.976 | D | 0.542 | neutral | None | None | None | None | N |
H/W | 0.3394 | likely_benign | 0.3325 | benign | 0.827 | Stabilizing | 0.997 | D | 0.555 | neutral | None | None | None | None | N |
H/Y | 0.0639 | likely_benign | 0.0597 | benign | 1.119 | Stabilizing | 0.026 | N | 0.181 | neutral | N | 0.424355132 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.