Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19945 | 60058;60059;60060 | chr2:178592071;178592070;178592069 | chr2:179456798;179456797;179456796 |
N2AB | 18304 | 55135;55136;55137 | chr2:178592071;178592070;178592069 | chr2:179456798;179456797;179456796 |
N2A | 17377 | 52354;52355;52356 | chr2:178592071;178592070;178592069 | chr2:179456798;179456797;179456796 |
N2B | 10880 | 32863;32864;32865 | chr2:178592071;178592070;178592069 | chr2:179456798;179456797;179456796 |
Novex-1 | 11005 | 33238;33239;33240 | chr2:178592071;178592070;178592069 | chr2:179456798;179456797;179456796 |
Novex-2 | 11072 | 33439;33440;33441 | chr2:178592071;178592070;178592069 | chr2:179456798;179456797;179456796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.81 | N | 0.451 | 0.154 | 0.460438652622 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02773E-05 |
N/K | None | None | 0.379 | N | 0.257 | 0.095 | 0.0806252709748 | gnomAD-4.0.0 | 7.52974E-06 | None | None | None | None | N | None | 0 | 2.23964E-05 | None | 0 | 0 | None | 0 | 0 | 8.09693E-06 | 0 | 1.65772E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1711 | likely_benign | 0.1567 | benign | -0.836 | Destabilizing | 0.25 | N | 0.269 | neutral | None | None | None | None | N |
N/C | 0.1327 | likely_benign | 0.1269 | benign | 0.045 | Stabilizing | 0.992 | D | 0.429 | neutral | None | None | None | None | N |
N/D | 0.2184 | likely_benign | 0.2368 | benign | -0.989 | Destabilizing | 0.549 | D | 0.295 | neutral | N | 0.496527449 | None | None | N |
N/E | 0.3587 | ambiguous | 0.3695 | ambiguous | -0.896 | Destabilizing | 0.617 | D | 0.243 | neutral | None | None | None | None | N |
N/F | 0.3275 | likely_benign | 0.3242 | benign | -0.59 | Destabilizing | 0.92 | D | 0.449 | neutral | None | None | None | None | N |
N/G | 0.2576 | likely_benign | 0.2311 | benign | -1.179 | Destabilizing | 0.25 | N | 0.283 | neutral | None | None | None | None | N |
N/H | 0.0781 | likely_benign | 0.0801 | benign | -0.989 | Destabilizing | 0.896 | D | 0.357 | neutral | N | 0.419760176 | None | None | N |
N/I | 0.1155 | likely_benign | 0.1109 | benign | 0.036 | Stabilizing | 0.81 | D | 0.451 | neutral | N | 0.448312214 | None | None | N |
N/K | 0.2434 | likely_benign | 0.2558 | benign | -0.428 | Destabilizing | 0.379 | N | 0.257 | neutral | N | 0.415045003 | None | None | N |
N/L | 0.1549 | likely_benign | 0.1519 | benign | 0.036 | Stabilizing | 0.447 | N | 0.391 | neutral | None | None | None | None | N |
N/M | 0.1965 | likely_benign | 0.1889 | benign | 0.612 | Stabilizing | 0.972 | D | 0.388 | neutral | None | None | None | None | N |
N/P | 0.8605 | likely_pathogenic | 0.8789 | pathogenic | -0.225 | Destabilizing | 0.92 | D | 0.409 | neutral | None | None | None | None | N |
N/Q | 0.2095 | likely_benign | 0.1969 | benign | -1.06 | Destabilizing | 0.85 | D | 0.35 | neutral | None | None | None | None | N |
N/R | 0.26 | likely_benign | 0.2773 | benign | -0.427 | Destabilizing | 0.617 | D | 0.356 | neutral | None | None | None | None | N |
N/S | 0.0724 | likely_benign | 0.0702 | benign | -0.999 | Destabilizing | 0.007 | N | 0.055 | neutral | N | 0.426203359 | None | None | N |
N/T | 0.0907 | likely_benign | 0.094 | benign | -0.728 | Destabilizing | 0.002 | N | 0.048 | neutral | N | 0.334018343 | None | None | N |
N/V | 0.1262 | likely_benign | 0.1212 | benign | -0.225 | Destabilizing | 0.447 | N | 0.405 | neutral | None | None | None | None | N |
N/W | 0.6173 | likely_pathogenic | 0.6262 | pathogenic | -0.399 | Destabilizing | 0.992 | D | 0.509 | neutral | None | None | None | None | N |
N/Y | 0.1116 | likely_benign | 0.1185 | benign | -0.185 | Destabilizing | 0.963 | D | 0.402 | neutral | N | 0.496874166 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.