Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19954 | 60085;60086;60087 | chr2:178592044;178592043;178592042 | chr2:179456771;179456770;179456769 |
N2AB | 18313 | 55162;55163;55164 | chr2:178592044;178592043;178592042 | chr2:179456771;179456770;179456769 |
N2A | 17386 | 52381;52382;52383 | chr2:178592044;178592043;178592042 | chr2:179456771;179456770;179456769 |
N2B | 10889 | 32890;32891;32892 | chr2:178592044;178592043;178592042 | chr2:179456771;179456770;179456769 |
Novex-1 | 11014 | 33265;33266;33267 | chr2:178592044;178592043;178592042 | chr2:179456771;179456770;179456769 |
Novex-2 | 11081 | 33466;33467;33468 | chr2:178592044;178592043;178592042 | chr2:179456771;179456770;179456769 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs774004055 | 0.484 | 0.999 | N | 0.777 | 0.475 | 0.441636318388 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/V | rs774004055 | 0.484 | 0.999 | N | 0.777 | 0.475 | 0.441636318388 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6328 | likely_pathogenic | 0.6108 | pathogenic | -0.31 | Destabilizing | 0.996 | D | 0.545 | neutral | N | 0.472138799 | None | None | I |
E/C | 0.9533 | likely_pathogenic | 0.9466 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
E/D | 0.8571 | likely_pathogenic | 0.8383 | pathogenic | -1.268 | Destabilizing | 0.998 | D | 0.389 | neutral | N | 0.50263977 | None | None | I |
E/F | 0.9739 | likely_pathogenic | 0.968 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/G | 0.8055 | likely_pathogenic | 0.7971 | pathogenic | -0.577 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.497866831 | None | None | I |
E/H | 0.9344 | likely_pathogenic | 0.9143 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
E/I | 0.7224 | likely_pathogenic | 0.6928 | pathogenic | 0.382 | Stabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
E/K | 0.6689 | likely_pathogenic | 0.6283 | pathogenic | -0.65 | Destabilizing | 0.767 | D | 0.314 | neutral | N | 0.473152757 | None | None | I |
E/L | 0.9119 | likely_pathogenic | 0.8881 | pathogenic | 0.382 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
E/M | 0.8327 | likely_pathogenic | 0.8038 | pathogenic | 0.683 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
E/N | 0.9137 | likely_pathogenic | 0.9022 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
E/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
E/Q | 0.3356 | likely_benign | 0.297 | benign | -0.636 | Destabilizing | 0.996 | D | 0.548 | neutral | N | 0.473379793 | None | None | I |
E/R | 0.7894 | likely_pathogenic | 0.7563 | pathogenic | -0.806 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | I |
E/S | 0.7359 | likely_pathogenic | 0.7063 | pathogenic | -1.189 | Destabilizing | 0.997 | D | 0.472 | neutral | None | None | None | None | I |
E/T | 0.7314 | likely_pathogenic | 0.7089 | pathogenic | -0.94 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/V | 0.4732 | ambiguous | 0.4339 | ambiguous | 0.173 | Stabilizing | 0.999 | D | 0.777 | deleterious | N | 0.466081538 | None | None | I |
E/W | 0.9921 | likely_pathogenic | 0.9902 | pathogenic | -1.464 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
E/Y | 0.9669 | likely_pathogenic | 0.9606 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.