Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19961 | 60106;60107;60108 | chr2:178592023;178592022;178592021 | chr2:179456750;179456749;179456748 |
N2AB | 18320 | 55183;55184;55185 | chr2:178592023;178592022;178592021 | chr2:179456750;179456749;179456748 |
N2A | 17393 | 52402;52403;52404 | chr2:178592023;178592022;178592021 | chr2:179456750;179456749;179456748 |
N2B | 10896 | 32911;32912;32913 | chr2:178592023;178592022;178592021 | chr2:179456750;179456749;179456748 |
Novex-1 | 11021 | 33286;33287;33288 | chr2:178592023;178592022;178592021 | chr2:179456750;179456749;179456748 |
Novex-2 | 11088 | 33487;33488;33489 | chr2:178592023;178592022;178592021 | chr2:179456750;179456749;179456748 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.051 | D | 0.256 | 0.196 | 0.244539031024 | gnomAD-4.0.0 | 1.59297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43386E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0841 | likely_benign | 0.0805 | benign | -1.428 | Destabilizing | 0.454 | N | 0.496 | neutral | N | 0.479040553 | None | None | N |
P/C | 0.4532 | ambiguous | 0.428 | ambiguous | -0.762 | Destabilizing | 0.998 | D | 0.61 | neutral | None | None | None | None | N |
P/D | 0.2884 | likely_benign | 0.2562 | benign | -1.303 | Destabilizing | 0.525 | D | 0.503 | neutral | None | None | None | None | N |
P/E | 0.2198 | likely_benign | 0.2016 | benign | -1.304 | Destabilizing | 0.029 | N | 0.159 | neutral | None | None | None | None | N |
P/F | 0.4478 | ambiguous | 0.426 | ambiguous | -1.079 | Destabilizing | 0.974 | D | 0.597 | neutral | None | None | None | None | N |
P/G | 0.3161 | likely_benign | 0.2869 | benign | -1.736 | Destabilizing | 0.842 | D | 0.573 | neutral | None | None | None | None | N |
P/H | 0.2136 | likely_benign | 0.1918 | benign | -1.256 | Destabilizing | 0.028 | N | 0.406 | neutral | N | 0.477804474 | None | None | N |
P/I | 0.2346 | likely_benign | 0.2409 | benign | -0.684 | Destabilizing | 0.949 | D | 0.607 | neutral | None | None | None | None | N |
P/K | 0.2755 | likely_benign | 0.257 | benign | -1.179 | Destabilizing | 0.842 | D | 0.484 | neutral | None | None | None | None | N |
P/L | 0.1231 | likely_benign | 0.1212 | benign | -0.684 | Destabilizing | 0.669 | D | 0.627 | neutral | N | 0.511499688 | None | None | N |
P/M | 0.2786 | likely_benign | 0.2812 | benign | -0.473 | Destabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | N |
P/N | 0.2459 | likely_benign | 0.2337 | benign | -0.948 | Destabilizing | 0.842 | D | 0.609 | neutral | None | None | None | None | N |
P/Q | 0.1566 | likely_benign | 0.1466 | benign | -1.128 | Destabilizing | 0.842 | D | 0.579 | neutral | None | None | None | None | N |
P/R | 0.2004 | likely_benign | 0.1807 | benign | -0.626 | Destabilizing | 0.801 | D | 0.605 | neutral | N | 0.513057126 | None | None | N |
P/S | 0.1304 | likely_benign | 0.123 | benign | -1.424 | Destabilizing | 0.669 | D | 0.501 | neutral | N | 0.515828073 | None | None | N |
P/T | 0.1158 | likely_benign | 0.1117 | benign | -1.323 | Destabilizing | 0.051 | N | 0.256 | neutral | D | 0.522023326 | None | None | N |
P/V | 0.1641 | likely_benign | 0.1638 | benign | -0.898 | Destabilizing | 0.728 | D | 0.583 | neutral | None | None | None | None | N |
P/W | 0.6402 | likely_pathogenic | 0.5928 | pathogenic | -1.282 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
P/Y | 0.4079 | ambiguous | 0.3846 | ambiguous | -0.994 | Destabilizing | 0.949 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.