Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19962 | 60109;60110;60111 | chr2:178592020;178592019;178592018 | chr2:179456747;179456746;179456745 |
N2AB | 18321 | 55186;55187;55188 | chr2:178592020;178592019;178592018 | chr2:179456747;179456746;179456745 |
N2A | 17394 | 52405;52406;52407 | chr2:178592020;178592019;178592018 | chr2:179456747;179456746;179456745 |
N2B | 10897 | 32914;32915;32916 | chr2:178592020;178592019;178592018 | chr2:179456747;179456746;179456745 |
Novex-1 | 11022 | 33289;33290;33291 | chr2:178592020;178592019;178592018 | chr2:179456747;179456746;179456745 |
Novex-2 | 11089 | 33490;33491;33492 | chr2:178592020;178592019;178592018 | chr2:179456747;179456746;179456745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs2050323196 | None | 0.64 | N | 0.501 | 0.386 | 0.27132560031 | gnomAD-4.0.0 | 6.16102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09722E-06 | 0 | 0 |
F/S | rs878939618 | None | 0.984 | N | 0.626 | 0.325 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/S | rs878939618 | None | 0.984 | N | 0.626 | 0.325 | None | gnomAD-4.0.0 | 1.31491E-05 | None | None | None | None | N | None | 4.82509E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.676 | likely_pathogenic | 0.6714 | pathogenic | -2.618 | Highly Destabilizing | 0.919 | D | 0.553 | neutral | None | None | None | None | N |
F/C | 0.4485 | ambiguous | 0.4733 | ambiguous | -1.113 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.483215161 | None | None | N |
F/D | 0.8997 | likely_pathogenic | 0.8902 | pathogenic | -2.991 | Highly Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/E | 0.94 | likely_pathogenic | 0.9373 | pathogenic | -2.829 | Highly Destabilizing | 0.988 | D | 0.675 | prob.neutral | None | None | None | None | N |
F/G | 0.8886 | likely_pathogenic | 0.8766 | pathogenic | -2.978 | Highly Destabilizing | 0.988 | D | 0.65 | neutral | None | None | None | None | N |
F/H | 0.6539 | likely_pathogenic | 0.6653 | pathogenic | -1.437 | Destabilizing | 0.976 | D | 0.657 | neutral | None | None | None | None | N |
F/I | 0.6508 | likely_pathogenic | 0.677 | pathogenic | -1.448 | Destabilizing | 0.896 | D | 0.499 | neutral | N | 0.481947714 | None | None | N |
F/K | 0.9653 | likely_pathogenic | 0.9643 | pathogenic | -1.747 | Destabilizing | 0.988 | D | 0.681 | prob.neutral | None | None | None | None | N |
F/L | 0.9338 | likely_pathogenic | 0.9321 | pathogenic | -1.448 | Destabilizing | 0.64 | D | 0.501 | neutral | N | 0.469412866 | None | None | N |
F/M | 0.7809 | likely_pathogenic | 0.775 | pathogenic | -0.922 | Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | N |
F/N | 0.7932 | likely_pathogenic | 0.8033 | pathogenic | -2.139 | Highly Destabilizing | 0.988 | D | 0.702 | prob.neutral | None | None | None | None | N |
F/P | 0.8319 | likely_pathogenic | 0.855 | pathogenic | -1.846 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/Q | 0.9218 | likely_pathogenic | 0.9206 | pathogenic | -2.189 | Highly Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
F/R | 0.9285 | likely_pathogenic | 0.9236 | pathogenic | -1.143 | Destabilizing | 0.988 | D | 0.707 | prob.neutral | None | None | None | None | N |
F/S | 0.5977 | likely_pathogenic | 0.58 | pathogenic | -2.654 | Highly Destabilizing | 0.984 | D | 0.626 | neutral | N | 0.481187245 | None | None | N |
F/T | 0.8153 | likely_pathogenic | 0.82 | pathogenic | -2.408 | Highly Destabilizing | 0.988 | D | 0.628 | neutral | None | None | None | None | N |
F/V | 0.5555 | ambiguous | 0.5695 | pathogenic | -1.846 | Destabilizing | 0.896 | D | 0.494 | neutral | N | 0.481440735 | None | None | N |
F/W | 0.4711 | ambiguous | 0.4208 | ambiguous | -0.524 | Destabilizing | 0.988 | D | 0.606 | neutral | None | None | None | None | N |
F/Y | 0.1256 | likely_benign | 0.1269 | benign | -0.798 | Destabilizing | 0.004 | N | 0.246 | neutral | N | 0.45327253 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.