Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19964 | 60115;60116;60117 | chr2:178592014;178592013;178592012 | chr2:179456741;179456740;179456739 |
N2AB | 18323 | 55192;55193;55194 | chr2:178592014;178592013;178592012 | chr2:179456741;179456740;179456739 |
N2A | 17396 | 52411;52412;52413 | chr2:178592014;178592013;178592012 | chr2:179456741;179456740;179456739 |
N2B | 10899 | 32920;32921;32922 | chr2:178592014;178592013;178592012 | chr2:179456741;179456740;179456739 |
Novex-1 | 11024 | 33295;33296;33297 | chr2:178592014;178592013;178592012 | chr2:179456741;179456740;179456739 |
Novex-2 | 11091 | 33496;33497;33498 | chr2:178592014;178592013;178592012 | chr2:179456741;179456740;179456739 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs918361300 | None | 0.983 | N | 0.635 | 0.219 | 0.298403945805 | gnomAD-4.0.0 | 3.4228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6991E-06 | 1.16012E-05 | 1.65755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2715 | likely_benign | 0.2195 | benign | -0.414 | Destabilizing | 0.996 | D | 0.634 | neutral | N | 0.462135165 | None | None | N |
E/C | 0.8956 | likely_pathogenic | 0.8796 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.7 | prob.delet. | None | None | None | None | N |
E/D | 0.2859 | likely_benign | 0.2501 | benign | -0.913 | Destabilizing | 0.996 | D | 0.634 | neutral | N | 0.497140737 | None | None | N |
E/F | 0.8703 | likely_pathogenic | 0.8382 | pathogenic | 0.445 | Stabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
E/G | 0.4819 | ambiguous | 0.4143 | ambiguous | -0.827 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.492871068 | None | None | N |
E/H | 0.7352 | likely_pathogenic | 0.6787 | pathogenic | 0.318 | Stabilizing | 1.0 | D | 0.684 | prob.delet. | None | None | None | None | N |
E/I | 0.4548 | ambiguous | 0.3905 | ambiguous | 0.726 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/K | 0.409 | ambiguous | 0.3356 | benign | -0.309 | Destabilizing | 0.983 | D | 0.635 | neutral | N | 0.518574802 | None | None | N |
E/L | 0.5456 | ambiguous | 0.4661 | ambiguous | 0.726 | Stabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
E/M | 0.541 | ambiguous | 0.4781 | ambiguous | 1.032 | Stabilizing | 1.0 | D | 0.73 | deleterious | None | None | None | None | N |
E/N | 0.5372 | ambiguous | 0.4812 | ambiguous | -0.973 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/P | 0.8326 | likely_pathogenic | 0.7464 | pathogenic | 0.368 | Stabilizing | 1.0 | D | 0.653 | prob.neutral | None | None | None | None | N |
E/Q | 0.2339 | likely_benign | 0.1943 | benign | -0.769 | Destabilizing | 0.991 | D | 0.659 | prob.neutral | N | 0.479595127 | None | None | N |
E/R | 0.5883 | likely_pathogenic | 0.5057 | ambiguous | 0.032 | Stabilizing | 0.522 | D | 0.397 | neutral | None | None | None | None | N |
E/S | 0.3638 | ambiguous | 0.309 | benign | -1.307 | Destabilizing | 0.997 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/T | 0.2867 | likely_benign | 0.2524 | benign | -0.95 | Destabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/V | 0.2475 | likely_benign | 0.2101 | benign | 0.368 | Stabilizing | 0.999 | D | 0.671 | prob.neutral | N | 0.518921519 | None | None | N |
E/W | 0.9663 | likely_pathogenic | 0.9542 | pathogenic | 0.695 | Stabilizing | 1.0 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/Y | 0.8194 | likely_pathogenic | 0.7731 | pathogenic | 0.731 | Stabilizing | 1.0 | D | 0.727 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.