Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19967 | 60124;60125;60126 | chr2:178592005;178592004;178592003 | chr2:179456732;179456731;179456730 |
N2AB | 18326 | 55201;55202;55203 | chr2:178592005;178592004;178592003 | chr2:179456732;179456731;179456730 |
N2A | 17399 | 52420;52421;52422 | chr2:178592005;178592004;178592003 | chr2:179456732;179456731;179456730 |
N2B | 10902 | 32929;32930;32931 | chr2:178592005;178592004;178592003 | chr2:179456732;179456731;179456730 |
Novex-1 | 11027 | 33304;33305;33306 | chr2:178592005;178592004;178592003 | chr2:179456732;179456731;179456730 |
Novex-2 | 11094 | 33505;33506;33507 | chr2:178592005;178592004;178592003 | chr2:179456732;179456731;179456730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs780485428 | -0.091 | 0.682 | N | 0.428 | 0.25 | 0.241078983079 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/E | rs780485428 | -0.091 | 0.682 | N | 0.428 | 0.25 | 0.241078983079 | gnomAD-4.0.0 | 4.79194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2688 | likely_benign | 0.2615 | benign | 0.039 | Stabilizing | 0.74 | D | 0.453 | neutral | None | None | None | None | N |
K/C | 0.6472 | likely_pathogenic | 0.6429 | pathogenic | -0.476 | Destabilizing | 0.996 | D | 0.707 | prob.delet. | None | None | None | None | N |
K/D | 0.4597 | ambiguous | 0.4731 | ambiguous | -0.367 | Destabilizing | 0.909 | D | 0.612 | neutral | None | None | None | None | N |
K/E | 0.1608 | likely_benign | 0.1592 | benign | -0.36 | Destabilizing | 0.682 | D | 0.428 | neutral | N | 0.428163442 | None | None | N |
K/F | 0.6252 | likely_pathogenic | 0.6289 | pathogenic | -0.244 | Destabilizing | 0.996 | D | 0.665 | prob.neutral | None | None | None | None | N |
K/G | 0.388 | ambiguous | 0.3811 | ambiguous | -0.112 | Destabilizing | 0.909 | D | 0.369 | neutral | None | None | None | None | N |
K/H | 0.2759 | likely_benign | 0.2721 | benign | -0.201 | Destabilizing | 0.987 | D | 0.599 | neutral | None | None | None | None | N |
K/I | 0.2727 | likely_benign | 0.2798 | benign | 0.361 | Stabilizing | 0.938 | D | 0.719 | prob.delet. | N | 0.497562025 | None | None | N |
K/L | 0.2664 | likely_benign | 0.2692 | benign | 0.361 | Stabilizing | 0.909 | D | 0.369 | neutral | None | None | None | None | N |
K/M | 0.2075 | likely_benign | 0.209 | benign | -0.158 | Destabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | N |
K/N | 0.32 | likely_benign | 0.3374 | benign | -0.074 | Destabilizing | 0.883 | D | 0.63 | neutral | N | 0.497735383 | None | None | N |
K/P | 0.7798 | likely_pathogenic | 0.7625 | pathogenic | 0.278 | Stabilizing | 0.984 | D | 0.617 | neutral | None | None | None | None | N |
K/Q | 0.1204 | likely_benign | 0.1171 | benign | -0.172 | Destabilizing | 0.883 | D | 0.652 | prob.neutral | N | 0.454888683 | None | None | N |
K/R | 0.0892 | likely_benign | 0.0881 | benign | -0.119 | Destabilizing | 0.007 | N | 0.253 | neutral | N | 0.479053622 | None | None | N |
K/S | 0.3223 | likely_benign | 0.3229 | benign | -0.383 | Destabilizing | 0.74 | D | 0.58 | neutral | None | None | None | None | N |
K/T | 0.1487 | likely_benign | 0.1483 | benign | -0.254 | Destabilizing | 0.883 | D | 0.554 | neutral | N | 0.496175158 | None | None | N |
K/V | 0.2446 | likely_benign | 0.2392 | benign | 0.278 | Stabilizing | 0.953 | D | 0.628 | neutral | None | None | None | None | N |
K/W | 0.7361 | likely_pathogenic | 0.7234 | pathogenic | -0.376 | Destabilizing | 0.996 | D | 0.706 | prob.delet. | None | None | None | None | N |
K/Y | 0.5184 | ambiguous | 0.5268 | ambiguous | -0.024 | Destabilizing | 0.984 | D | 0.648 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.