Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1997260139;60140;60141 chr2:178591990;178591989;178591988chr2:179456717;179456716;179456715
N2AB1833155216;55217;55218 chr2:178591990;178591989;178591988chr2:179456717;179456716;179456715
N2A1740452435;52436;52437 chr2:178591990;178591989;178591988chr2:179456717;179456716;179456715
N2B1090732944;32945;32946 chr2:178591990;178591989;178591988chr2:179456717;179456716;179456715
Novex-11103233319;33320;33321 chr2:178591990;178591989;178591988chr2:179456717;179456716;179456715
Novex-21109933520;33521;33522 chr2:178591990;178591989;178591988chr2:179456717;179456716;179456715
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTG
  • RefSeq wild type template codon: AAC
  • Domain: Fn3-32
  • Domain position: 96
  • Structural Position: 131
  • Q(SASA): 0.2464
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1553645773 None 0.026 N 0.339 0.035 0.265929055128 gnomAD-2.1.1 4.05E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.94E-06 0
L/F rs1553645773 None 0.026 N 0.339 0.035 0.265929055128 gnomAD-4.0.0 3.18893E-06 None None None None N None 5.67859E-05 0 None 0 0 None 0 0 2.86138E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1401 likely_benign 0.1395 benign -1.581 Destabilizing 0.007 N 0.389 neutral None None None None N
L/C 0.3977 ambiguous 0.4176 ambiguous -0.852 Destabilizing 0.492 N 0.295 neutral None None None None N
L/D 0.6535 likely_pathogenic 0.6913 pathogenic -1.353 Destabilizing 0.035 N 0.595 neutral None None None None N
L/E 0.2903 likely_benign 0.2838 benign -1.413 Destabilizing 0.018 N 0.519 neutral None None None None N
L/F 0.1495 likely_benign 0.1656 benign -1.375 Destabilizing 0.026 N 0.339 neutral N 0.460681292 None None N
L/G 0.3966 ambiguous 0.4099 ambiguous -1.834 Destabilizing 0.035 N 0.507 neutral None None None None N
L/H 0.2356 likely_benign 0.2481 benign -1.076 Destabilizing 0.204 N 0.499 neutral None None None None N
L/I 0.0677 likely_benign 0.0703 benign -0.983 Destabilizing None N 0.067 neutral None None None None N
L/K 0.1836 likely_benign 0.178 benign -1.067 Destabilizing None N 0.26 neutral None None None None N
L/M 0.0753 likely_benign 0.075 benign -0.594 Destabilizing None N 0.061 neutral N 0.391168066 None None N
L/N 0.2931 likely_benign 0.3177 benign -0.81 Destabilizing 0.112 N 0.634 neutral None None None None N
L/P 0.8382 likely_pathogenic 0.8819 pathogenic -1.151 Destabilizing 0.204 N 0.624 neutral None None None None N
L/Q 0.1183 likely_benign 0.109 benign -1.11 Destabilizing 0.001 N 0.325 neutral None None None None N
L/R 0.1538 likely_benign 0.1474 benign -0.345 Destabilizing 0.018 N 0.525 neutral None None None None N
L/S 0.1675 likely_benign 0.1803 benign -1.303 Destabilizing 0.026 N 0.419 neutral N 0.423067053 None None N
L/T 0.1211 likely_benign 0.1219 benign -1.263 Destabilizing 0.018 N 0.405 neutral None None None None N
L/V 0.0647 likely_benign 0.0615 benign -1.151 Destabilizing None N 0.052 neutral N 0.389781199 None None N
L/W 0.3269 likely_benign 0.3632 ambiguous -1.398 Destabilizing 0.69 D 0.501 neutral N 0.461548084 None None N
L/Y 0.3634 ambiguous 0.3879 ambiguous -1.191 Destabilizing 0.204 N 0.469 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.