Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19972 | 60139;60140;60141 | chr2:178591990;178591989;178591988 | chr2:179456717;179456716;179456715 |
N2AB | 18331 | 55216;55217;55218 | chr2:178591990;178591989;178591988 | chr2:179456717;179456716;179456715 |
N2A | 17404 | 52435;52436;52437 | chr2:178591990;178591989;178591988 | chr2:179456717;179456716;179456715 |
N2B | 10907 | 32944;32945;32946 | chr2:178591990;178591989;178591988 | chr2:179456717;179456716;179456715 |
Novex-1 | 11032 | 33319;33320;33321 | chr2:178591990;178591989;178591988 | chr2:179456717;179456716;179456715 |
Novex-2 | 11099 | 33520;33521;33522 | chr2:178591990;178591989;178591988 | chr2:179456717;179456716;179456715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1553645773 | None | 0.026 | N | 0.339 | 0.035 | 0.265929055128 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
L/F | rs1553645773 | None | 0.026 | N | 0.339 | 0.035 | 0.265929055128 | gnomAD-4.0.0 | 3.18893E-06 | None | None | None | None | N | None | 5.67859E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86138E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1401 | likely_benign | 0.1395 | benign | -1.581 | Destabilizing | 0.007 | N | 0.389 | neutral | None | None | None | None | N |
L/C | 0.3977 | ambiguous | 0.4176 | ambiguous | -0.852 | Destabilizing | 0.492 | N | 0.295 | neutral | None | None | None | None | N |
L/D | 0.6535 | likely_pathogenic | 0.6913 | pathogenic | -1.353 | Destabilizing | 0.035 | N | 0.595 | neutral | None | None | None | None | N |
L/E | 0.2903 | likely_benign | 0.2838 | benign | -1.413 | Destabilizing | 0.018 | N | 0.519 | neutral | None | None | None | None | N |
L/F | 0.1495 | likely_benign | 0.1656 | benign | -1.375 | Destabilizing | 0.026 | N | 0.339 | neutral | N | 0.460681292 | None | None | N |
L/G | 0.3966 | ambiguous | 0.4099 | ambiguous | -1.834 | Destabilizing | 0.035 | N | 0.507 | neutral | None | None | None | None | N |
L/H | 0.2356 | likely_benign | 0.2481 | benign | -1.076 | Destabilizing | 0.204 | N | 0.499 | neutral | None | None | None | None | N |
L/I | 0.0677 | likely_benign | 0.0703 | benign | -0.983 | Destabilizing | None | N | 0.067 | neutral | None | None | None | None | N |
L/K | 0.1836 | likely_benign | 0.178 | benign | -1.067 | Destabilizing | None | N | 0.26 | neutral | None | None | None | None | N |
L/M | 0.0753 | likely_benign | 0.075 | benign | -0.594 | Destabilizing | None | N | 0.061 | neutral | N | 0.391168066 | None | None | N |
L/N | 0.2931 | likely_benign | 0.3177 | benign | -0.81 | Destabilizing | 0.112 | N | 0.634 | neutral | None | None | None | None | N |
L/P | 0.8382 | likely_pathogenic | 0.8819 | pathogenic | -1.151 | Destabilizing | 0.204 | N | 0.624 | neutral | None | None | None | None | N |
L/Q | 0.1183 | likely_benign | 0.109 | benign | -1.11 | Destabilizing | 0.001 | N | 0.325 | neutral | None | None | None | None | N |
L/R | 0.1538 | likely_benign | 0.1474 | benign | -0.345 | Destabilizing | 0.018 | N | 0.525 | neutral | None | None | None | None | N |
L/S | 0.1675 | likely_benign | 0.1803 | benign | -1.303 | Destabilizing | 0.026 | N | 0.419 | neutral | N | 0.423067053 | None | None | N |
L/T | 0.1211 | likely_benign | 0.1219 | benign | -1.263 | Destabilizing | 0.018 | N | 0.405 | neutral | None | None | None | None | N |
L/V | 0.0647 | likely_benign | 0.0615 | benign | -1.151 | Destabilizing | None | N | 0.052 | neutral | N | 0.389781199 | None | None | N |
L/W | 0.3269 | likely_benign | 0.3632 | ambiguous | -1.398 | Destabilizing | 0.69 | D | 0.501 | neutral | N | 0.461548084 | None | None | N |
L/Y | 0.3634 | ambiguous | 0.3879 | ambiguous | -1.191 | Destabilizing | 0.204 | N | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.