Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19977 | 60154;60155;60156 | chr2:178591890;178591889;178591888 | chr2:179456617;179456616;179456615 |
N2AB | 18336 | 55231;55232;55233 | chr2:178591890;178591889;178591888 | chr2:179456617;179456616;179456615 |
N2A | 17409 | 52450;52451;52452 | chr2:178591890;178591889;178591888 | chr2:179456617;179456616;179456615 |
N2B | 10912 | 32959;32960;32961 | chr2:178591890;178591889;178591888 | chr2:179456617;179456616;179456615 |
Novex-1 | 11037 | 33334;33335;33336 | chr2:178591890;178591889;178591888 | chr2:179456617;179456616;179456615 |
Novex-2 | 11104 | 33535;33536;33537 | chr2:178591890;178591889;178591888 | chr2:179456617;179456616;179456615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs768561791 | -0.232 | 1.0 | N | 0.798 | 0.316 | 0.371344866733 | gnomAD-2.1.1 | 8.31E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.82E-05 | 0 |
P/T | rs768561791 | -0.232 | 1.0 | N | 0.798 | 0.316 | 0.371344866733 | gnomAD-4.0.0 | 1.60914E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87322E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1089 | likely_benign | 0.1122 | benign | -0.489 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.510144533 | None | None | I |
P/C | 0.5739 | likely_pathogenic | 0.6498 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/D | 0.8549 | likely_pathogenic | 0.8824 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
P/E | 0.4754 | ambiguous | 0.5083 | ambiguous | -0.238 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
P/F | 0.6885 | likely_pathogenic | 0.7402 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
P/G | 0.6745 | likely_pathogenic | 0.7112 | pathogenic | -0.606 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/H | 0.3758 | ambiguous | 0.4241 | ambiguous | -0.202 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.488722117 | None | None | I |
P/I | 0.2517 | likely_benign | 0.2917 | benign | -0.335 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
P/K | 0.3877 | ambiguous | 0.4298 | ambiguous | -0.257 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
P/L | 0.1821 | likely_benign | 0.2052 | benign | -0.335 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.512742121 | None | None | I |
P/M | 0.3971 | ambiguous | 0.433 | ambiguous | -0.273 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
P/N | 0.6851 | likely_pathogenic | 0.7278 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
P/Q | 0.2465 | likely_benign | 0.2649 | benign | -0.296 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
P/R | 0.2783 | likely_benign | 0.3123 | benign | 0.235 | Stabilizing | 1.0 | D | 0.833 | deleterious | N | 0.50910717 | None | None | I |
P/S | 0.264 | likely_benign | 0.2836 | benign | -0.421 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.474225486 | None | None | I |
P/T | 0.163 | likely_benign | 0.1814 | benign | -0.442 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.51405163 | None | None | I |
P/V | 0.1795 | likely_benign | 0.199 | benign | -0.352 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
P/W | 0.8844 | likely_pathogenic | 0.9134 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
P/Y | 0.6747 | likely_pathogenic | 0.7368 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.