Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19980 | 60163;60164;60165 | chr2:178591881;178591880;178591879 | chr2:179456608;179456607;179456606 |
N2AB | 18339 | 55240;55241;55242 | chr2:178591881;178591880;178591879 | chr2:179456608;179456607;179456606 |
N2A | 17412 | 52459;52460;52461 | chr2:178591881;178591880;178591879 | chr2:179456608;179456607;179456606 |
N2B | 10915 | 32968;32969;32970 | chr2:178591881;178591880;178591879 | chr2:179456608;179456607;179456606 |
Novex-1 | 11040 | 33343;33344;33345 | chr2:178591881;178591880;178591879 | chr2:179456608;179456607;179456606 |
Novex-2 | 11107 | 33544;33545;33546 | chr2:178591881;178591880;178591879 | chr2:179456608;179456607;179456606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 1.0 | N | 0.839 | 0.345 | 0.301122078929 | gnomAD-4.0.0 | 1.60523E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1719 | likely_benign | 0.1753 | benign | -1.743 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.471511574 | None | None | N |
P/C | 0.7521 | likely_pathogenic | 0.778 | pathogenic | -1.14 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
P/D | 0.9226 | likely_pathogenic | 0.931 | pathogenic | -2.268 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/E | 0.7518 | likely_pathogenic | 0.7803 | pathogenic | -2.262 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
P/F | 0.7889 | likely_pathogenic | 0.8077 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/G | 0.7572 | likely_pathogenic | 0.7565 | pathogenic | -2.067 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/H | 0.5273 | ambiguous | 0.5487 | ambiguous | -1.687 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
P/I | 0.5822 | likely_pathogenic | 0.6069 | pathogenic | -0.926 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/K | 0.5948 | likely_pathogenic | 0.6174 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
P/L | 0.3646 | ambiguous | 0.3668 | ambiguous | -0.926 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.515089394 | None | None | N |
P/M | 0.6039 | likely_pathogenic | 0.6241 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/N | 0.7882 | likely_pathogenic | 0.8091 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
P/Q | 0.4455 | ambiguous | 0.4617 | ambiguous | -1.506 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.501794078 | None | None | N |
P/R | 0.448 | ambiguous | 0.4427 | ambiguous | -0.933 | Destabilizing | 1.0 | D | 0.897 | deleterious | N | 0.499832295 | None | None | N |
P/S | 0.3927 | ambiguous | 0.4088 | ambiguous | -1.72 | Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.476852968 | None | None | N |
P/T | 0.3754 | ambiguous | 0.4055 | ambiguous | -1.621 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.514582415 | None | None | N |
P/V | 0.4527 | ambiguous | 0.4795 | ambiguous | -1.168 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
P/W | 0.9302 | likely_pathogenic | 0.9336 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
P/Y | 0.797 | likely_pathogenic | 0.8199 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.