Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19984 | 60175;60176;60177 | chr2:178591869;178591868;178591867 | chr2:179456596;179456595;179456594 |
N2AB | 18343 | 55252;55253;55254 | chr2:178591869;178591868;178591867 | chr2:179456596;179456595;179456594 |
N2A | 17416 | 52471;52472;52473 | chr2:178591869;178591868;178591867 | chr2:179456596;179456595;179456594 |
N2B | 10919 | 32980;32981;32982 | chr2:178591869;178591868;178591867 | chr2:179456596;179456595;179456594 |
Novex-1 | 11044 | 33355;33356;33357 | chr2:178591869;178591868;178591867 | chr2:179456596;179456595;179456594 |
Novex-2 | 11111 | 33556;33557;33558 | chr2:178591869;178591868;178591867 | chr2:179456596;179456595;179456594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 1.0 | N | 0.799 | 0.361 | 0.551344072312 | gnomAD-4.0.0 | 6.85192E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.999E-07 | 0 | 0 |
L/P | None | None | 1.0 | N | 0.893 | 0.562 | 0.804142074079 | gnomAD-4.0.0 | 1.59401E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4379E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.97 | likely_pathogenic | 0.973 | pathogenic | -2.444 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | I |
L/C | 0.9104 | likely_pathogenic | 0.9225 | pathogenic | -2.081 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.422 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
L/E | 0.9984 | likely_pathogenic | 0.9988 | pathogenic | -3.197 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
L/F | 0.8432 | likely_pathogenic | 0.9133 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
L/G | 0.9946 | likely_pathogenic | 0.9958 | pathogenic | -2.957 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
L/H | 0.9933 | likely_pathogenic | 0.9965 | pathogenic | -2.619 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
L/I | 0.2846 | likely_benign | 0.2969 | benign | -0.943 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
L/K | 0.9942 | likely_pathogenic | 0.9962 | pathogenic | -1.929 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
L/M | 0.5608 | ambiguous | 0.6216 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.50579482 | None | None | I |
L/N | 0.9959 | likely_pathogenic | 0.9971 | pathogenic | -2.381 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
L/P | 0.9898 | likely_pathogenic | 0.9924 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.893 | deleterious | N | 0.468466561 | None | None | I |
L/Q | 0.9914 | likely_pathogenic | 0.9944 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.513392144 | None | None | I |
L/R | 0.9856 | likely_pathogenic | 0.9906 | pathogenic | -1.742 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.524913033 | None | None | I |
L/S | 0.9957 | likely_pathogenic | 0.9967 | pathogenic | -2.91 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
L/T | 0.9571 | likely_pathogenic | 0.9592 | pathogenic | -2.558 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
L/V | 0.2814 | likely_benign | 0.2481 | benign | -1.429 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.491145846 | None | None | I |
L/W | 0.9902 | likely_pathogenic | 0.9953 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
L/Y | 0.9908 | likely_pathogenic | 0.9955 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.