Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19985 | 60178;60179;60180 | chr2:178591866;178591865;178591864 | chr2:179456593;179456592;179456591 |
N2AB | 18344 | 55255;55256;55257 | chr2:178591866;178591865;178591864 | chr2:179456593;179456592;179456591 |
N2A | 17417 | 52474;52475;52476 | chr2:178591866;178591865;178591864 | chr2:179456593;179456592;179456591 |
N2B | 10920 | 32983;32984;32985 | chr2:178591866;178591865;178591864 | chr2:179456593;179456592;179456591 |
Novex-1 | 11045 | 33358;33359;33360 | chr2:178591866;178591865;178591864 | chr2:179456593;179456592;179456591 |
Novex-2 | 11112 | 33559;33560;33561 | chr2:178591866;178591865;178591864 | chr2:179456593;179456592;179456591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | None | None | 0.014 | N | 0.283 | 0.326 | 0.218112801441 | gnomAD-4.0.0 | 1.59394E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7691 | likely_pathogenic | 0.7619 | pathogenic | -0.31 | Destabilizing | 0.86 | D | 0.645 | neutral | None | None | None | None | N |
H/C | 0.3487 | ambiguous | 0.3681 | ambiguous | 0.603 | Stabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
H/D | 0.7716 | likely_pathogenic | 0.7536 | pathogenic | -0.487 | Destabilizing | 0.99 | D | 0.667 | neutral | N | 0.472709227 | None | None | N |
H/E | 0.6926 | likely_pathogenic | 0.6842 | pathogenic | -0.39 | Destabilizing | 0.926 | D | 0.523 | neutral | None | None | None | None | N |
H/F | 0.5552 | ambiguous | 0.5687 | pathogenic | 0.95 | Stabilizing | 0.915 | D | 0.661 | neutral | None | None | None | None | N |
H/G | 0.761 | likely_pathogenic | 0.7656 | pathogenic | -0.684 | Destabilizing | 0.926 | D | 0.662 | neutral | None | None | None | None | N |
H/I | 0.6764 | likely_pathogenic | 0.6763 | pathogenic | 0.719 | Stabilizing | 0.956 | D | 0.787 | deleterious | None | None | None | None | N |
H/K | 0.3998 | ambiguous | 0.405 | ambiguous | -0.153 | Destabilizing | 0.978 | D | 0.651 | neutral | None | None | None | None | N |
H/L | 0.3543 | ambiguous | 0.3623 | ambiguous | 0.719 | Stabilizing | 0.698 | D | 0.675 | prob.neutral | N | 0.480501991 | None | None | N |
H/M | 0.7729 | likely_pathogenic | 0.7758 | pathogenic | 0.552 | Stabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
H/N | 0.3941 | ambiguous | 0.3728 | ambiguous | -0.259 | Destabilizing | 0.904 | D | 0.541 | neutral | N | 0.486811887 | None | None | N |
H/P | 0.9074 | likely_pathogenic | 0.924 | pathogenic | 0.398 | Stabilizing | 0.99 | D | 0.783 | deleterious | N | 0.490372268 | None | None | N |
H/Q | 0.3931 | ambiguous | 0.3636 | ambiguous | None | Stabilizing | 0.97 | D | 0.569 | neutral | N | 0.439364657 | None | None | N |
H/R | 0.15 | likely_benign | 0.1458 | benign | -0.889 | Destabilizing | 0.97 | D | 0.547 | neutral | N | 0.428147586 | None | None | N |
H/S | 0.6433 | likely_pathogenic | 0.6328 | pathogenic | -0.118 | Destabilizing | 0.926 | D | 0.651 | neutral | None | None | None | None | N |
H/T | 0.6706 | likely_pathogenic | 0.651 | pathogenic | 0.081 | Stabilizing | 0.978 | D | 0.7 | prob.neutral | None | None | None | None | N |
H/V | 0.6144 | likely_pathogenic | 0.6136 | pathogenic | 0.398 | Stabilizing | 0.956 | D | 0.706 | prob.neutral | None | None | None | None | N |
H/W | 0.5899 | likely_pathogenic | 0.6136 | pathogenic | 1.137 | Stabilizing | 0.994 | D | 0.767 | deleterious | None | None | None | None | N |
H/Y | 0.2478 | likely_benign | 0.251 | benign | 1.236 | Stabilizing | 0.014 | N | 0.283 | neutral | N | 0.50626444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.