Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19986 | 60181;60182;60183 | chr2:178591863;178591862;178591861 | chr2:179456590;179456589;179456588 |
N2AB | 18345 | 55258;55259;55260 | chr2:178591863;178591862;178591861 | chr2:179456590;179456589;179456588 |
N2A | 17418 | 52477;52478;52479 | chr2:178591863;178591862;178591861 | chr2:179456590;179456589;179456588 |
N2B | 10921 | 32986;32987;32988 | chr2:178591863;178591862;178591861 | chr2:179456590;179456589;179456588 |
Novex-1 | 11046 | 33361;33362;33363 | chr2:178591863;178591862;178591861 | chr2:179456590;179456589;179456588 |
Novex-2 | 11113 | 33562;33563;33564 | chr2:178591863;178591862;178591861 | chr2:179456590;179456589;179456588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 0.997 | N | 0.773 | 0.374 | 0.476598743245 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/R | None | None | 0.999 | N | 0.555 | 0.381 | 0.315609569513 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.737 | likely_pathogenic | 0.6653 | pathogenic | -0.841 | Destabilizing | 0.985 | D | 0.669 | neutral | None | None | None | None | N |
H/C | 0.4108 | ambiguous | 0.4144 | ambiguous | 0.046 | Stabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
H/D | 0.8658 | likely_pathogenic | 0.819 | pathogenic | -1.126 | Destabilizing | 0.99 | D | 0.641 | neutral | N | 0.485945096 | None | None | N |
H/E | 0.8853 | likely_pathogenic | 0.8517 | pathogenic | -0.992 | Destabilizing | 0.993 | D | 0.517 | neutral | None | None | None | None | N |
H/F | 0.5376 | ambiguous | 0.5262 | ambiguous | 0.716 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
H/G | 0.898 | likely_pathogenic | 0.8743 | pathogenic | -1.244 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
H/I | 0.5652 | likely_pathogenic | 0.5242 | ambiguous | 0.303 | Stabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
H/K | 0.8958 | likely_pathogenic | 0.8707 | pathogenic | -0.54 | Destabilizing | 0.993 | D | 0.638 | neutral | None | None | None | None | N |
H/L | 0.3573 | ambiguous | 0.3326 | benign | 0.303 | Stabilizing | 0.997 | D | 0.773 | deleterious | N | 0.361421162 | None | None | N |
H/M | 0.7806 | likely_pathogenic | 0.7722 | pathogenic | 0.092 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
H/N | 0.5126 | ambiguous | 0.425 | ambiguous | -0.881 | Destabilizing | 0.997 | D | 0.547 | neutral | N | 0.49671945 | None | None | N |
H/P | 0.3045 | likely_benign | 0.2439 | benign | -0.06 | Destabilizing | 0.135 | N | 0.45 | neutral | N | 0.446175986 | None | None | N |
H/Q | 0.7621 | likely_pathogenic | 0.6983 | pathogenic | -0.59 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.477613614 | None | None | N |
H/R | 0.6878 | likely_pathogenic | 0.6263 | pathogenic | -1.209 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.515227853 | None | None | N |
H/S | 0.7324 | likely_pathogenic | 0.6675 | pathogenic | -0.756 | Destabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | N |
H/T | 0.7653 | likely_pathogenic | 0.7002 | pathogenic | -0.505 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
H/V | 0.5092 | ambiguous | 0.4766 | ambiguous | -0.06 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
H/W | 0.5965 | likely_pathogenic | 0.6143 | pathogenic | 1.071 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
H/Y | 0.2393 | likely_benign | 0.2206 | benign | 1.012 | Stabilizing | 0.999 | D | 0.539 | neutral | N | 0.444290474 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.