Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19991 | 60196;60197;60198 | chr2:178591848;178591847;178591846 | chr2:179456575;179456574;179456573 |
N2AB | 18350 | 55273;55274;55275 | chr2:178591848;178591847;178591846 | chr2:179456575;179456574;179456573 |
N2A | 17423 | 52492;52493;52494 | chr2:178591848;178591847;178591846 | chr2:179456575;179456574;179456573 |
N2B | 10926 | 33001;33002;33003 | chr2:178591848;178591847;178591846 | chr2:179456575;179456574;179456573 |
Novex-1 | 11051 | 33376;33377;33378 | chr2:178591848;178591847;178591846 | chr2:179456575;179456574;179456573 |
Novex-2 | 11118 | 33577;33578;33579 | chr2:178591848;178591847;178591846 | chr2:179456575;179456574;179456573 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.946 | N | 0.7 | 0.275 | 0.304760801415 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4591 | ambiguous | 0.426 | ambiguous | -0.15 | Destabilizing | 0.87 | D | 0.549 | neutral | None | None | None | None | N |
K/C | 0.8287 | likely_pathogenic | 0.8348 | pathogenic | -0.121 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
K/D | 0.7532 | likely_pathogenic | 0.7153 | pathogenic | -0.267 | Destabilizing | 0.959 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/E | 0.2797 | likely_benign | 0.2627 | benign | -0.241 | Destabilizing | 0.716 | D | 0.481 | neutral | N | 0.499834326 | None | None | N |
K/F | 0.9415 | likely_pathogenic | 0.9326 | pathogenic | -0.225 | Destabilizing | 0.994 | D | 0.788 | deleterious | None | None | None | None | N |
K/G | 0.6226 | likely_pathogenic | 0.5819 | pathogenic | -0.424 | Destabilizing | 0.959 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/H | 0.515 | ambiguous | 0.4752 | ambiguous | -0.878 | Destabilizing | 0.994 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/I | 0.6557 | likely_pathogenic | 0.6374 | pathogenic | 0.515 | Stabilizing | 0.979 | D | 0.801 | deleterious | None | None | None | None | N |
K/L | 0.6457 | likely_pathogenic | 0.6236 | pathogenic | 0.515 | Stabilizing | 0.959 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/M | 0.4177 | ambiguous | 0.4 | ambiguous | 0.564 | Stabilizing | 0.998 | D | 0.713 | prob.delet. | N | 0.503235655 | None | None | N |
K/N | 0.6383 | likely_pathogenic | 0.5943 | pathogenic | 0.071 | Stabilizing | 0.946 | D | 0.705 | prob.neutral | N | 0.505434934 | None | None | N |
K/P | 0.8404 | likely_pathogenic | 0.8092 | pathogenic | 0.323 | Stabilizing | 0.979 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Q | 0.191 | likely_benign | 0.1707 | benign | -0.182 | Destabilizing | 0.946 | D | 0.7 | prob.neutral | N | 0.47012779 | None | None | N |
K/R | 0.0999 | likely_benign | 0.0932 | benign | -0.184 | Destabilizing | 0.035 | N | 0.301 | neutral | N | 0.503973496 | None | None | N |
K/S | 0.5733 | likely_pathogenic | 0.5287 | ambiguous | -0.436 | Destabilizing | 0.87 | D | 0.599 | neutral | None | None | None | None | N |
K/T | 0.3621 | ambiguous | 0.3327 | benign | -0.247 | Destabilizing | 0.946 | D | 0.693 | prob.neutral | N | 0.508512524 | None | None | N |
K/V | 0.5798 | likely_pathogenic | 0.5641 | pathogenic | 0.323 | Stabilizing | 0.959 | D | 0.742 | deleterious | None | None | None | None | N |
K/W | 0.9373 | likely_pathogenic | 0.9285 | pathogenic | -0.157 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
K/Y | 0.8472 | likely_pathogenic | 0.8292 | pathogenic | 0.183 | Stabilizing | 0.979 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.