Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19992 | 60199;60200;60201 | chr2:178591845;178591844;178591843 | chr2:179456572;179456571;179456570 |
N2AB | 18351 | 55276;55277;55278 | chr2:178591845;178591844;178591843 | chr2:179456572;179456571;179456570 |
N2A | 17424 | 52495;52496;52497 | chr2:178591845;178591844;178591843 | chr2:179456572;179456571;179456570 |
N2B | 10927 | 33004;33005;33006 | chr2:178591845;178591844;178591843 | chr2:179456572;179456571;179456570 |
Novex-1 | 11052 | 33379;33380;33381 | chr2:178591845;178591844;178591843 | chr2:179456572;179456571;179456570 |
Novex-2 | 11119 | 33580;33581;33582 | chr2:178591845;178591844;178591843 | chr2:179456572;179456571;179456570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.928 | N | 0.435 | 0.497 | 0.335414705075 | gnomAD-4.0.0 | 1.59236E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1542 | likely_benign | 0.1309 | benign | -0.782 | Destabilizing | 0.928 | D | 0.435 | neutral | N | 0.489266592 | None | None | N |
T/C | 0.6363 | likely_pathogenic | 0.6227 | pathogenic | -0.58 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/D | 0.3241 | likely_benign | 0.2894 | benign | -0.891 | Destabilizing | 0.968 | D | 0.674 | neutral | None | None | None | None | N |
T/E | 0.329 | likely_benign | 0.2922 | benign | -0.897 | Destabilizing | 0.983 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/F | 0.4447 | ambiguous | 0.4014 | ambiguous | -0.907 | Destabilizing | 0.997 | D | 0.795 | deleterious | None | None | None | None | N |
T/G | 0.3533 | ambiguous | 0.3142 | benign | -1.029 | Destabilizing | 0.895 | D | 0.659 | neutral | None | None | None | None | N |
T/H | 0.2952 | likely_benign | 0.264 | benign | -1.342 | Destabilizing | 0.996 | D | 0.774 | deleterious | None | None | None | None | N |
T/I | 0.5441 | ambiguous | 0.4683 | ambiguous | -0.217 | Destabilizing | 0.989 | D | 0.751 | deleterious | N | 0.505649327 | None | None | N |
T/K | 0.2747 | likely_benign | 0.2367 | benign | -0.836 | Destabilizing | 0.968 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/L | 0.2007 | likely_benign | 0.181 | benign | -0.217 | Destabilizing | 0.972 | D | 0.641 | neutral | None | None | None | None | N |
T/M | 0.117 | likely_benign | 0.1047 | benign | 0.184 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/N | 0.0965 | likely_benign | 0.0893 | benign | -0.846 | Destabilizing | 0.085 | N | 0.293 | neutral | N | 0.469479707 | None | None | N |
T/P | 0.81 | likely_pathogenic | 0.7851 | pathogenic | -0.374 | Destabilizing | 0.989 | D | 0.739 | prob.delet. | D | 0.524260561 | None | None | N |
T/Q | 0.2693 | likely_benign | 0.233 | benign | -1.11 | Destabilizing | 0.983 | D | 0.742 | deleterious | None | None | None | None | N |
T/R | 0.2479 | likely_benign | 0.2131 | benign | -0.498 | Destabilizing | 0.983 | D | 0.751 | deleterious | None | None | None | None | N |
T/S | 0.1221 | likely_benign | 0.1078 | benign | -1.031 | Destabilizing | 0.865 | D | 0.417 | neutral | N | 0.491759134 | None | None | N |
T/V | 0.4067 | ambiguous | 0.3446 | ambiguous | -0.374 | Destabilizing | 0.972 | D | 0.595 | neutral | None | None | None | None | N |
T/W | 0.7065 | likely_pathogenic | 0.6831 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
T/Y | 0.3574 | ambiguous | 0.3333 | benign | -0.601 | Destabilizing | 0.997 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.