Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19993 | 60202;60203;60204 | chr2:178591842;178591841;178591840 | chr2:179456569;179456568;179456567 |
N2AB | 18352 | 55279;55280;55281 | chr2:178591842;178591841;178591840 | chr2:179456569;179456568;179456567 |
N2A | 17425 | 52498;52499;52500 | chr2:178591842;178591841;178591840 | chr2:179456569;179456568;179456567 |
N2B | 10928 | 33007;33008;33009 | chr2:178591842;178591841;178591840 | chr2:179456569;179456568;179456567 |
Novex-1 | 11053 | 33382;33383;33384 | chr2:178591842;178591841;178591840 | chr2:179456569;179456568;179456567 |
Novex-2 | 11120 | 33583;33584;33585 | chr2:178591842;178591841;178591840 | chr2:179456569;179456568;179456567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.957 | N | 0.326 | 0.176 | 0.267299060538 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2649 | likely_benign | 0.1915 | benign | -0.584 | Destabilizing | 0.996 | D | 0.633 | neutral | N | 0.442290319 | None | None | N |
E/C | 0.9175 | likely_pathogenic | 0.8937 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
E/D | 0.5154 | ambiguous | 0.4025 | ambiguous | -1.333 | Destabilizing | 0.996 | D | 0.509 | neutral | N | 0.508533954 | None | None | N |
E/F | 0.9338 | likely_pathogenic | 0.9026 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/G | 0.4663 | ambiguous | 0.3438 | ambiguous | -0.916 | Destabilizing | 0.999 | D | 0.777 | deleterious | N | 0.482136786 | None | None | N |
E/H | 0.7141 | likely_pathogenic | 0.6155 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
E/I | 0.7386 | likely_pathogenic | 0.6325 | pathogenic | 0.306 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
E/K | 0.3965 | ambiguous | 0.2661 | benign | -0.707 | Destabilizing | 0.992 | D | 0.511 | neutral | N | 0.512515622 | None | None | N |
E/L | 0.8121 | likely_pathogenic | 0.7198 | pathogenic | 0.306 | Stabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
E/M | 0.6881 | likely_pathogenic | 0.5897 | pathogenic | 0.758 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/N | 0.6036 | likely_pathogenic | 0.4673 | ambiguous | -0.945 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/P | 0.9976 | likely_pathogenic | 0.9974 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/Q | 0.2292 | likely_benign | 0.1762 | benign | -0.823 | Destabilizing | 0.957 | D | 0.326 | neutral | N | 0.4798272 | None | None | N |
E/R | 0.5382 | ambiguous | 0.4292 | ambiguous | -0.706 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.3475 | ambiguous | 0.2556 | benign | -1.315 | Destabilizing | 0.997 | D | 0.601 | neutral | None | None | None | None | N |
E/T | 0.3696 | ambiguous | 0.2687 | benign | -1.036 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
E/V | 0.4819 | ambiguous | 0.3866 | ambiguous | 0.032 | Stabilizing | 0.999 | D | 0.831 | deleterious | N | 0.484099656 | None | None | N |
E/W | 0.9777 | likely_pathogenic | 0.9666 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/Y | 0.8842 | likely_pathogenic | 0.8388 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.