Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19997 | 60214;60215;60216 | chr2:178591830;178591829;178591828 | chr2:179456557;179456556;179456555 |
N2AB | 18356 | 55291;55292;55293 | chr2:178591830;178591829;178591828 | chr2:179456557;179456556;179456555 |
N2A | 17429 | 52510;52511;52512 | chr2:178591830;178591829;178591828 | chr2:179456557;179456556;179456555 |
N2B | 10932 | 33019;33020;33021 | chr2:178591830;178591829;178591828 | chr2:179456557;179456556;179456555 |
Novex-1 | 11057 | 33394;33395;33396 | chr2:178591830;178591829;178591828 | chr2:179456557;179456556;179456555 |
Novex-2 | 11124 | 33595;33596;33597 | chr2:178591830;178591829;178591828 | chr2:179456557;179456556;179456555 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.989 | N | 0.539 | 0.278 | 0.673914265645 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1437 | likely_benign | 0.142 | benign | -1.779 | Destabilizing | 0.005 | N | 0.155 | neutral | N | 0.394939089 | None | None | N |
V/C | 0.6288 | likely_pathogenic | 0.6591 | pathogenic | -1.142 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
V/D | 0.4457 | ambiguous | 0.483 | ambiguous | -2.651 | Highly Destabilizing | 0.801 | D | 0.593 | neutral | N | 0.460644006 | None | None | N |
V/E | 0.2359 | likely_benign | 0.2558 | benign | -2.473 | Highly Destabilizing | 0.728 | D | 0.455 | neutral | None | None | None | None | N |
V/F | 0.1691 | likely_benign | 0.1771 | benign | -1.12 | Destabilizing | 0.989 | D | 0.539 | neutral | N | 0.485849095 | None | None | N |
V/G | 0.23 | likely_benign | 0.2433 | benign | -2.255 | Highly Destabilizing | 0.669 | D | 0.497 | neutral | N | 0.455526188 | None | None | N |
V/H | 0.4278 | ambiguous | 0.4444 | ambiguous | -2.214 | Highly Destabilizing | 0.993 | D | 0.641 | neutral | None | None | None | None | N |
V/I | 0.079 | likely_benign | 0.0794 | benign | -0.468 | Destabilizing | 0.625 | D | 0.45 | neutral | N | 0.475074741 | None | None | N |
V/K | 0.1913 | likely_benign | 0.2141 | benign | -1.561 | Destabilizing | 0.728 | D | 0.487 | neutral | None | None | None | None | N |
V/L | 0.1441 | likely_benign | 0.1578 | benign | -0.468 | Destabilizing | 0.625 | D | 0.423 | neutral | N | 0.437844505 | None | None | N |
V/M | 0.1371 | likely_benign | 0.1405 | benign | -0.367 | Destabilizing | 0.991 | D | 0.527 | neutral | None | None | None | None | N |
V/N | 0.274 | likely_benign | 0.2963 | benign | -1.793 | Destabilizing | 0.974 | D | 0.609 | neutral | None | None | None | None | N |
V/P | 0.9468 | likely_pathogenic | 0.9544 | pathogenic | -0.877 | Destabilizing | 0.974 | D | 0.565 | neutral | None | None | None | None | N |
V/Q | 0.189 | likely_benign | 0.2079 | benign | -1.693 | Destabilizing | 0.172 | N | 0.394 | neutral | None | None | None | None | N |
V/R | 0.1736 | likely_benign | 0.193 | benign | -1.333 | Destabilizing | 0.949 | D | 0.61 | neutral | None | None | None | None | N |
V/S | 0.1684 | likely_benign | 0.1728 | benign | -2.281 | Highly Destabilizing | 0.728 | D | 0.452 | neutral | None | None | None | None | N |
V/T | 0.1421 | likely_benign | 0.1409 | benign | -1.987 | Destabilizing | 0.842 | D | 0.42 | neutral | None | None | None | None | N |
V/W | 0.7856 | likely_pathogenic | 0.7933 | pathogenic | -1.763 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/Y | 0.4755 | ambiguous | 0.5004 | ambiguous | -1.325 | Destabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.