Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19999 | 60220;60221;60222 | chr2:178591824;178591823;178591822 | chr2:179456551;179456550;179456549 |
N2AB | 18358 | 55297;55298;55299 | chr2:178591824;178591823;178591822 | chr2:179456551;179456550;179456549 |
N2A | 17431 | 52516;52517;52518 | chr2:178591824;178591823;178591822 | chr2:179456551;179456550;179456549 |
N2B | 10934 | 33025;33026;33027 | chr2:178591824;178591823;178591822 | chr2:179456551;179456550;179456549 |
Novex-1 | 11059 | 33400;33401;33402 | chr2:178591824;178591823;178591822 | chr2:179456551;179456550;179456549 |
Novex-2 | 11126 | 33601;33602;33603 | chr2:178591824;178591823;178591822 | chr2:179456551;179456550;179456549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs778293115 | -0.907 | 0.716 | N | 0.447 | 0.135 | 0.159798565429 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs778293115 | -0.907 | 0.716 | N | 0.447 | 0.135 | 0.159798565429 | gnomAD-4.0.0 | 4.77692E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.2996E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2589 | likely_benign | 0.2483 | benign | -0.807 | Destabilizing | 0.769 | D | 0.606 | neutral | None | None | None | None | N |
N/C | 0.3072 | likely_benign | 0.3265 | benign | 0.068 | Stabilizing | 0.994 | D | 0.813 | deleterious | None | None | None | None | N |
N/D | 0.2378 | likely_benign | 0.2382 | benign | -0.812 | Destabilizing | 0.834 | D | 0.445 | neutral | N | 0.461182724 | None | None | N |
N/E | 0.2999 | likely_benign | 0.2914 | benign | -0.691 | Destabilizing | 0.87 | D | 0.543 | neutral | None | None | None | None | N |
N/F | 0.6032 | likely_pathogenic | 0.596 | pathogenic | -0.429 | Destabilizing | 0.979 | D | 0.819 | deleterious | None | None | None | None | N |
N/G | 0.3157 | likely_benign | 0.3239 | benign | -1.176 | Destabilizing | 0.87 | D | 0.458 | neutral | None | None | None | None | N |
N/H | 0.1049 | likely_benign | 0.1044 | benign | -1.01 | Destabilizing | 0.991 | D | 0.673 | neutral | D | 0.522540614 | None | None | N |
N/I | 0.2405 | likely_benign | 0.2276 | benign | 0.146 | Stabilizing | 0.898 | D | 0.805 | deleterious | N | 0.477653687 | None | None | N |
N/K | 0.1716 | likely_benign | 0.1692 | benign | -0.564 | Destabilizing | 0.834 | D | 0.564 | neutral | N | 0.407348239 | None | None | N |
N/L | 0.2346 | likely_benign | 0.233 | benign | 0.146 | Stabilizing | 0.921 | D | 0.734 | prob.delet. | None | None | None | None | N |
N/M | 0.3056 | likely_benign | 0.2842 | benign | 0.554 | Stabilizing | 0.994 | D | 0.793 | deleterious | None | None | None | None | N |
N/P | 0.935 | likely_pathogenic | 0.9391 | pathogenic | -0.142 | Destabilizing | 0.979 | D | 0.778 | deleterious | None | None | None | None | N |
N/Q | 0.2261 | likely_benign | 0.2185 | benign | -0.97 | Destabilizing | 0.979 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/R | 0.2173 | likely_benign | 0.22 | benign | -0.718 | Destabilizing | 0.959 | D | 0.662 | neutral | None | None | None | None | N |
N/S | 0.1178 | likely_benign | 0.1178 | benign | -1.072 | Destabilizing | 0.716 | D | 0.447 | neutral | N | 0.438439151 | None | None | N |
N/T | 0.1502 | likely_benign | 0.1387 | benign | -0.768 | Destabilizing | 0.016 | N | 0.363 | neutral | N | 0.430339742 | None | None | N |
N/V | 0.243 | likely_benign | 0.2268 | benign | -0.142 | Destabilizing | 0.921 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/W | 0.7498 | likely_pathogenic | 0.7492 | pathogenic | -0.297 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | N |
N/Y | 0.1957 | likely_benign | 0.2083 | benign | -0.091 | Destabilizing | 0.973 | D | 0.804 | deleterious | N | 0.504128212 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.