Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20008 | 60247;60248;60249 | chr2:178591797;178591796;178591795 | chr2:179456524;179456523;179456522 |
N2AB | 18367 | 55324;55325;55326 | chr2:178591797;178591796;178591795 | chr2:179456524;179456523;179456522 |
N2A | 17440 | 52543;52544;52545 | chr2:178591797;178591796;178591795 | chr2:179456524;179456523;179456522 |
N2B | 10943 | 33052;33053;33054 | chr2:178591797;178591796;178591795 | chr2:179456524;179456523;179456522 |
Novex-1 | 11068 | 33427;33428;33429 | chr2:178591797;178591796;178591795 | chr2:179456524;179456523;179456522 |
Novex-2 | 11135 | 33628;33629;33630 | chr2:178591797;178591796;178591795 | chr2:179456524;179456523;179456522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs199839492 | -0.002 | 0.801 | N | 0.542 | 0.404 | 0.420447328233 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.68653E-04 | None | 0 | None | 0 | 0 | 0 |
P/L | rs199839492 | -0.002 | 0.801 | N | 0.542 | 0.404 | 0.420447328233 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.94401E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs199839492 | -0.002 | 0.801 | N | 0.542 | 0.404 | 0.420447328233 | gnomAD-4.0.0 | 5.57924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.01414E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0743 | likely_benign | 0.078 | benign | -0.488 | Destabilizing | 0.625 | D | 0.439 | neutral | N | 0.478309834 | None | None | I |
P/C | 0.4944 | ambiguous | 0.6078 | pathogenic | -0.605 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | I |
P/D | 0.34 | likely_benign | 0.3843 | ambiguous | -0.176 | Destabilizing | 0.007 | N | 0.123 | neutral | None | None | None | None | I |
P/E | 0.1985 | likely_benign | 0.2129 | benign | -0.293 | Destabilizing | 0.002 | N | 0.159 | neutral | None | None | None | None | I |
P/F | 0.5226 | ambiguous | 0.5847 | pathogenic | -0.732 | Destabilizing | 0.991 | D | 0.518 | neutral | None | None | None | None | I |
P/G | 0.3213 | likely_benign | 0.3676 | ambiguous | -0.621 | Destabilizing | 0.688 | D | 0.478 | neutral | None | None | None | None | I |
P/H | 0.1906 | likely_benign | 0.2098 | benign | -0.205 | Destabilizing | 0.974 | D | 0.491 | neutral | None | None | None | None | I |
P/I | 0.2585 | likely_benign | 0.2914 | benign | -0.29 | Destabilizing | 0.974 | D | 0.539 | neutral | None | None | None | None | I |
P/K | 0.1963 | likely_benign | 0.2075 | benign | -0.349 | Destabilizing | 0.525 | D | 0.417 | neutral | None | None | None | None | I |
P/L | 0.1304 | likely_benign | 0.145 | benign | -0.29 | Destabilizing | 0.801 | D | 0.542 | neutral | N | 0.490174737 | None | None | I |
P/M | 0.2893 | likely_benign | 0.3201 | benign | -0.27 | Destabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | I |
P/N | 0.2772 | likely_benign | 0.3109 | benign | -0.083 | Destabilizing | 0.842 | D | 0.483 | neutral | None | None | None | None | I |
P/Q | 0.1284 | likely_benign | 0.1391 | benign | -0.341 | Destabilizing | 0.669 | D | 0.418 | neutral | D | 0.522023326 | None | None | I |
P/R | 0.1597 | likely_benign | 0.1678 | benign | 0.162 | Stabilizing | 0.801 | D | 0.474 | neutral | N | 0.513923918 | None | None | I |
P/S | 0.1336 | likely_benign | 0.1458 | benign | -0.478 | Destabilizing | 0.625 | D | 0.415 | neutral | N | 0.502013413 | None | None | I |
P/T | 0.1057 | likely_benign | 0.1135 | benign | -0.492 | Destabilizing | 0.801 | D | 0.409 | neutral | N | 0.471777313 | None | None | I |
P/V | 0.1624 | likely_benign | 0.1821 | benign | -0.32 | Destabilizing | 0.915 | D | 0.488 | neutral | None | None | None | None | I |
P/W | 0.674 | likely_pathogenic | 0.7355 | pathogenic | -0.796 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
P/Y | 0.4516 | ambiguous | 0.5088 | ambiguous | -0.487 | Destabilizing | 0.991 | D | 0.524 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.