Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20015 | 60268;60269;60270 | chr2:178591776;178591775;178591774 | chr2:179456503;179456502;179456501 |
N2AB | 18374 | 55345;55346;55347 | chr2:178591776;178591775;178591774 | chr2:179456503;179456502;179456501 |
N2A | 17447 | 52564;52565;52566 | chr2:178591776;178591775;178591774 | chr2:179456503;179456502;179456501 |
N2B | 10950 | 33073;33074;33075 | chr2:178591776;178591775;178591774 | chr2:179456503;179456502;179456501 |
Novex-1 | 11075 | 33448;33449;33450 | chr2:178591776;178591775;178591774 | chr2:179456503;179456502;179456501 |
Novex-2 | 11142 | 33649;33650;33651 | chr2:178591776;178591775;178591774 | chr2:179456503;179456502;179456501 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs575796706 | -2.174 | 0.117 | N | 0.358 | 0.066 | 0.154104182512 | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | N | None | 0 | 1.70116E-04 | None | 0 | 0 | None | 0 | None | 0 | 7.84E-06 | 0 |
E/D | rs575796706 | -2.174 | 0.117 | N | 0.358 | 0.066 | 0.154104182512 | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 0 | 3.93494E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs575796706 | -2.174 | 0.117 | N | 0.358 | 0.066 | 0.154104182512 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/D | rs575796706 | -2.174 | 0.117 | N | 0.358 | 0.066 | 0.154104182512 | gnomAD-4.0.0 | 1.9215E-05 | None | None | None | None | N | None | 0 | 2.8356E-04 | None | 0 | 0 | None | 0 | 0 | 1.18687E-05 | 0 | 0 |
E/Q | None | None | 0.997 | N | 0.805 | 0.321 | 0.243972157842 | gnomAD-4.0.0 | 3.18462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71935E-06 | 0 | 0 |
E/V | rs2050261843 | None | 0.997 | N | 0.789 | 0.548 | 0.677432480161 | gnomAD-4.0.0 | 2.05317E-06 | None | None | None | None | N | None | 8.96807E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8026 | likely_pathogenic | 0.8267 | pathogenic | -1.495 | Destabilizing | 0.977 | D | 0.724 | prob.delet. | N | 0.516922592 | None | None | N |
E/C | 0.9724 | likely_pathogenic | 0.9745 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/D | 0.6294 | likely_pathogenic | 0.694 | pathogenic | -1.946 | Destabilizing | 0.117 | N | 0.358 | neutral | N | 0.497991673 | None | None | N |
E/F | 0.9876 | likely_pathogenic | 0.9902 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
E/G | 0.8989 | likely_pathogenic | 0.9143 | pathogenic | -1.858 | Destabilizing | 0.993 | D | 0.755 | deleterious | D | 0.525444968 | None | None | N |
E/H | 0.964 | likely_pathogenic | 0.9705 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
E/I | 0.9555 | likely_pathogenic | 0.9683 | pathogenic | -0.448 | Destabilizing | 0.998 | D | 0.852 | deleterious | None | None | None | None | N |
E/K | 0.9522 | likely_pathogenic | 0.9627 | pathogenic | -1.449 | Destabilizing | 0.977 | D | 0.681 | prob.neutral | N | 0.510882204 | None | None | N |
E/L | 0.9661 | likely_pathogenic | 0.9727 | pathogenic | -0.448 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
E/M | 0.938 | likely_pathogenic | 0.9488 | pathogenic | 0.228 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/N | 0.9397 | likely_pathogenic | 0.9536 | pathogenic | -1.694 | Destabilizing | 0.99 | D | 0.819 | deleterious | None | None | None | None | N |
E/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -0.785 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
E/Q | 0.6731 | likely_pathogenic | 0.7014 | pathogenic | -1.398 | Destabilizing | 0.997 | D | 0.805 | deleterious | N | 0.508456596 | None | None | N |
E/R | 0.961 | likely_pathogenic | 0.9704 | pathogenic | -1.318 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
E/S | 0.7845 | likely_pathogenic | 0.8191 | pathogenic | -2.246 | Highly Destabilizing | 0.983 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/T | 0.9078 | likely_pathogenic | 0.9316 | pathogenic | -1.892 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
E/V | 0.9087 | likely_pathogenic | 0.9312 | pathogenic | -0.785 | Destabilizing | 0.997 | D | 0.789 | deleterious | N | 0.51291012 | None | None | N |
E/W | 0.9932 | likely_pathogenic | 0.9945 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/Y | 0.9719 | likely_pathogenic | 0.9789 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.