Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20028 | 60307;60308;60309 | chr2:178591737;178591736;178591735 | chr2:179456464;179456463;179456462 |
N2AB | 18387 | 55384;55385;55386 | chr2:178591737;178591736;178591735 | chr2:179456464;179456463;179456462 |
N2A | 17460 | 52603;52604;52605 | chr2:178591737;178591736;178591735 | chr2:179456464;179456463;179456462 |
N2B | 10963 | 33112;33113;33114 | chr2:178591737;178591736;178591735 | chr2:179456464;179456463;179456462 |
Novex-1 | 11088 | 33487;33488;33489 | chr2:178591737;178591736;178591735 | chr2:179456464;179456463;179456462 |
Novex-2 | 11155 | 33688;33689;33690 | chr2:178591737;178591736;178591735 | chr2:179456464;179456463;179456462 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.993 | N | 0.672 | 0.199 | 0.247872288689 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4138 | ambiguous | 0.4415 | ambiguous | -0.227 | Destabilizing | 0.983 | D | 0.589 | neutral | None | None | None | None | N |
K/C | 0.6599 | likely_pathogenic | 0.717 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/D | 0.6405 | likely_pathogenic | 0.6617 | pathogenic | 0.036 | Stabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/E | 0.1933 | likely_benign | 0.1966 | benign | 0.111 | Stabilizing | 0.955 | D | 0.512 | neutral | N | 0.450024368 | None | None | N |
K/F | 0.892 | likely_pathogenic | 0.9188 | pathogenic | -0.209 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/G | 0.546 | ambiguous | 0.583 | pathogenic | -0.494 | Destabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | N |
K/H | 0.3298 | likely_benign | 0.3432 | ambiguous | -0.625 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/I | 0.5888 | likely_pathogenic | 0.6298 | pathogenic | 0.425 | Stabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/L | 0.4918 | ambiguous | 0.524 | ambiguous | 0.425 | Stabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | N |
K/M | 0.3232 | likely_benign | 0.3475 | ambiguous | -0.03 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.471635501 | None | None | N |
K/N | 0.4599 | ambiguous | 0.49 | ambiguous | -0.252 | Destabilizing | 0.993 | D | 0.672 | neutral | N | 0.436169636 | None | None | N |
K/P | 0.9364 | likely_pathogenic | 0.9575 | pathogenic | 0.236 | Stabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
K/Q | 0.1098 | likely_benign | 0.1072 | benign | -0.27 | Destabilizing | 0.568 | D | 0.29 | neutral | N | 0.503088062 | None | None | N |
K/R | 0.0933 | likely_benign | 0.0981 | benign | -0.227 | Destabilizing | 0.955 | D | 0.526 | neutral | N | 0.492948426 | None | None | N |
K/S | 0.4116 | ambiguous | 0.4332 | ambiguous | -0.759 | Destabilizing | 0.983 | D | 0.567 | neutral | None | None | None | None | N |
K/T | 0.2042 | likely_benign | 0.2123 | benign | -0.502 | Destabilizing | 0.993 | D | 0.699 | prob.neutral | N | 0.473898518 | None | None | N |
K/V | 0.5052 | ambiguous | 0.5438 | ambiguous | 0.236 | Stabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/W | 0.8671 | likely_pathogenic | 0.9033 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/Y | 0.7265 | likely_pathogenic | 0.7896 | pathogenic | 0.108 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.