Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20029 | 60310;60311;60312 | chr2:178591734;178591733;178591732 | chr2:179456461;179456460;179456459 |
N2AB | 18388 | 55387;55388;55389 | chr2:178591734;178591733;178591732 | chr2:179456461;179456460;179456459 |
N2A | 17461 | 52606;52607;52608 | chr2:178591734;178591733;178591732 | chr2:179456461;179456460;179456459 |
N2B | 10964 | 33115;33116;33117 | chr2:178591734;178591733;178591732 | chr2:179456461;179456460;179456459 |
Novex-1 | 11089 | 33490;33491;33492 | chr2:178591734;178591733;178591732 | chr2:179456461;179456460;179456459 |
Novex-2 | 11156 | 33691;33692;33693 | chr2:178591734;178591733;178591732 | chr2:179456461;179456460;179456459 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.884 | N | 0.343 | 0.354 | 0.316198179892 | gnomAD-4.0.0 | 6.84351E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99604E-07 | 0 | 0 |
T/N | rs2050252504 | None | 1.0 | N | 0.67 | 0.35 | 0.319686207203 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs2050252504 | None | 1.0 | N | 0.67 | 0.35 | 0.319686207203 | gnomAD-4.0.0 | 2.47957E-06 | None | None | None | None | N | None | 2.67251E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69556E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1058 | likely_benign | 0.1123 | benign | -0.389 | Destabilizing | 0.998 | D | 0.442 | neutral | N | 0.503933424 | None | None | N |
T/C | 0.5179 | ambiguous | 0.5764 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/D | 0.4562 | ambiguous | 0.4658 | ambiguous | 0.399 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
T/E | 0.302 | likely_benign | 0.3111 | benign | 0.349 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
T/F | 0.3508 | ambiguous | 0.3677 | ambiguous | -0.718 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/G | 0.408 | ambiguous | 0.4267 | ambiguous | -0.559 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/H | 0.27 | likely_benign | 0.2812 | benign | -0.813 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/I | 0.1485 | likely_benign | 0.1625 | benign | -0.055 | Destabilizing | 0.884 | D | 0.343 | neutral | N | 0.464870643 | None | None | N |
T/K | 0.1644 | likely_benign | 0.1699 | benign | -0.371 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/L | 0.1103 | likely_benign | 0.1205 | benign | -0.055 | Destabilizing | 0.994 | D | 0.521 | neutral | None | None | None | None | N |
T/M | 0.085 | likely_benign | 0.0857 | benign | 0.001 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/N | 0.1345 | likely_benign | 0.1401 | benign | -0.222 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.486387813 | None | None | N |
T/P | 0.1765 | likely_benign | 0.2011 | benign | -0.135 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.460222719 | None | None | N |
T/Q | 0.2387 | likely_benign | 0.2446 | benign | -0.401 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
T/R | 0.1564 | likely_benign | 0.1667 | benign | -0.148 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
T/S | 0.1753 | likely_benign | 0.1808 | benign | -0.491 | Destabilizing | 0.999 | D | 0.463 | neutral | N | 0.504512214 | None | None | N |
T/V | 0.1218 | likely_benign | 0.1338 | benign | -0.135 | Destabilizing | 0.985 | D | 0.453 | neutral | None | None | None | None | N |
T/W | 0.6409 | likely_pathogenic | 0.6588 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/Y | 0.3 | likely_benign | 0.3295 | benign | -0.424 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.