Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20032 | 60319;60320;60321 | chr2:178591725;178591724;178591723 | chr2:179456452;179456451;179456450 |
N2AB | 18391 | 55396;55397;55398 | chr2:178591725;178591724;178591723 | chr2:179456452;179456451;179456450 |
N2A | 17464 | 52615;52616;52617 | chr2:178591725;178591724;178591723 | chr2:179456452;179456451;179456450 |
N2B | 10967 | 33124;33125;33126 | chr2:178591725;178591724;178591723 | chr2:179456452;179456451;179456450 |
Novex-1 | 11092 | 33499;33500;33501 | chr2:178591725;178591724;178591723 | chr2:179456452;179456451;179456450 |
Novex-2 | 11159 | 33700;33701;33702 | chr2:178591725;178591724;178591723 | chr2:179456452;179456451;179456450 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1230376061 | None | None | N | 0.083 | 0.1 | 0.0846915920261 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/D | rs1230376061 | None | None | N | 0.083 | 0.1 | 0.0846915920261 | gnomAD-4.0.0 | 3.09934E-06 | None | None | None | None | N | None | 0 | 5.00484E-05 | None | 0 | 0 | None | 0 | 0 | 1.69554E-06 | 0 | 0 |
N/I | None | None | None | N | 0.156 | 0.252 | 0.36355261348 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1339 | likely_benign | 0.1333 | benign | -0.393 | Destabilizing | 0.015 | N | 0.185 | neutral | None | None | None | None | N |
N/C | 0.2785 | likely_benign | 0.3022 | benign | 0.021 | Stabilizing | 0.781 | D | 0.309 | neutral | None | None | None | None | N |
N/D | 0.0842 | likely_benign | 0.0866 | benign | 0.103 | Stabilizing | None | N | 0.083 | neutral | N | 0.390938779 | None | None | N |
N/E | 0.2011 | likely_benign | 0.2108 | benign | 0.134 | Stabilizing | None | N | 0.074 | neutral | None | None | None | None | N |
N/F | 0.4507 | ambiguous | 0.4721 | ambiguous | -0.68 | Destabilizing | 0.142 | N | 0.43 | neutral | None | None | None | None | N |
N/G | 0.1725 | likely_benign | 0.1764 | benign | -0.608 | Destabilizing | 0.064 | N | 0.127 | neutral | None | None | None | None | N |
N/H | 0.1028 | likely_benign | 0.1067 | benign | -0.415 | Destabilizing | 0.47 | N | 0.231 | neutral | N | 0.450872517 | None | None | N |
N/I | 0.1914 | likely_benign | 0.2079 | benign | 0.1 | Stabilizing | None | N | 0.156 | neutral | N | 0.420763041 | None | None | N |
N/K | 0.1841 | likely_benign | 0.1913 | benign | 0.082 | Stabilizing | 0.025 | N | 0.135 | neutral | N | 0.437308574 | None | None | N |
N/L | 0.2003 | likely_benign | 0.2031 | benign | 0.1 | Stabilizing | 0.002 | N | 0.206 | neutral | None | None | None | None | N |
N/M | 0.2539 | likely_benign | 0.2496 | benign | 0.037 | Stabilizing | 0.006 | N | 0.171 | neutral | None | None | None | None | N |
N/P | 0.589 | likely_pathogenic | 0.6379 | pathogenic | -0.037 | Destabilizing | 0.251 | N | 0.362 | neutral | None | None | None | None | N |
N/Q | 0.2046 | likely_benign | 0.204 | benign | -0.374 | Destabilizing | 0.076 | N | 0.143 | neutral | None | None | None | None | N |
N/R | 0.2302 | likely_benign | 0.2302 | benign | 0.125 | Stabilizing | 0.142 | N | 0.152 | neutral | None | None | None | None | N |
N/S | 0.0686 | likely_benign | 0.0667 | benign | -0.347 | Destabilizing | 0.025 | N | 0.15 | neutral | N | 0.401289059 | None | None | N |
N/T | 0.0939 | likely_benign | 0.0936 | benign | -0.151 | Destabilizing | 0.049 | N | 0.149 | neutral | N | 0.418122593 | None | None | N |
N/V | 0.1726 | likely_benign | 0.184 | benign | -0.037 | Destabilizing | None | N | 0.187 | neutral | None | None | None | None | N |
N/W | 0.6952 | likely_pathogenic | 0.7188 | pathogenic | -0.679 | Destabilizing | 0.931 | D | 0.317 | neutral | None | None | None | None | N |
N/Y | 0.1695 | likely_benign | 0.1914 | benign | -0.37 | Destabilizing | 0.202 | N | 0.395 | neutral | N | 0.470325069 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.