Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20033 | 60322;60323;60324 | chr2:178591722;178591721;178591720 | chr2:179456449;179456448;179456447 |
N2AB | 18392 | 55399;55400;55401 | chr2:178591722;178591721;178591720 | chr2:179456449;179456448;179456447 |
N2A | 17465 | 52618;52619;52620 | chr2:178591722;178591721;178591720 | chr2:179456449;179456448;179456447 |
N2B | 10968 | 33127;33128;33129 | chr2:178591722;178591721;178591720 | chr2:179456449;179456448;179456447 |
Novex-1 | 11093 | 33502;33503;33504 | chr2:178591722;178591721;178591720 | chr2:179456449;179456448;179456447 |
Novex-2 | 11160 | 33703;33704;33705 | chr2:178591722;178591721;178591720 | chr2:179456449;179456448;179456447 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs878993043 | -0.923 | 0.946 | N | 0.428 | 0.123 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/V | rs878993043 | -0.923 | 0.946 | N | 0.428 | 0.123 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.89E-05 | 0 | 0 |
L/V | rs878993043 | -0.923 | 0.946 | N | 0.428 | 0.123 | None | gnomAD-4.0.0 | 1.02556E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.67605E-05 | 0 | 2.84495E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2354 | likely_benign | 0.26 | benign | -1.957 | Destabilizing | 0.825 | D | 0.463 | neutral | None | None | None | None | N |
L/C | 0.3873 | ambiguous | 0.4274 | ambiguous | -1.056 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
L/D | 0.6835 | likely_pathogenic | 0.7469 | pathogenic | -2.129 | Highly Destabilizing | 0.988 | D | 0.661 | neutral | None | None | None | None | N |
L/E | 0.3418 | ambiguous | 0.3905 | ambiguous | -1.959 | Destabilizing | 0.976 | D | 0.643 | neutral | None | None | None | None | N |
L/F | 0.2925 | likely_benign | 0.3084 | benign | -1.18 | Destabilizing | 0.995 | D | 0.52 | neutral | N | 0.492545781 | None | None | N |
L/G | 0.4616 | ambiguous | 0.5056 | ambiguous | -2.421 | Highly Destabilizing | 0.976 | D | 0.643 | neutral | None | None | None | None | N |
L/H | 0.3026 | likely_benign | 0.3301 | benign | -1.756 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/I | 0.1708 | likely_benign | 0.1852 | benign | -0.657 | Destabilizing | 0.946 | D | 0.403 | neutral | N | 0.473439945 | None | None | N |
L/K | 0.2208 | likely_benign | 0.2418 | benign | -1.456 | Destabilizing | 0.976 | D | 0.614 | neutral | None | None | None | None | N |
L/M | 0.1046 | likely_benign | 0.1107 | benign | -0.476 | Destabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
L/N | 0.2951 | likely_benign | 0.3467 | ambiguous | -1.678 | Destabilizing | 0.988 | D | 0.685 | prob.neutral | None | None | None | None | N |
L/P | 0.1635 | likely_benign | 0.2119 | benign | -1.068 | Destabilizing | 0.005 | N | 0.517 | neutral | None | None | None | None | N |
L/Q | 0.1566 | likely_benign | 0.1669 | benign | -1.64 | Destabilizing | 0.988 | D | 0.648 | neutral | None | None | None | None | N |
L/R | 0.1743 | likely_benign | 0.1815 | benign | -1.077 | Destabilizing | 0.988 | D | 0.649 | neutral | None | None | None | None | N |
L/S | 0.2787 | likely_benign | 0.3223 | benign | -2.292 | Highly Destabilizing | 0.896 | D | 0.593 | neutral | N | 0.45535283 | None | None | N |
L/T | 0.1048 | likely_benign | 0.1194 | benign | -1.99 | Destabilizing | 0.919 | D | 0.525 | neutral | None | None | None | None | N |
L/V | 0.1257 | likely_benign | 0.1346 | benign | -1.068 | Destabilizing | 0.946 | D | 0.428 | neutral | N | 0.464569746 | None | None | N |
L/W | 0.4039 | ambiguous | 0.4284 | ambiguous | -1.527 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
L/Y | 0.4759 | ambiguous | 0.504 | ambiguous | -1.174 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.