Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2003360322;60323;60324 chr2:178591722;178591721;178591720chr2:179456449;179456448;179456447
N2AB1839255399;55400;55401 chr2:178591722;178591721;178591720chr2:179456449;179456448;179456447
N2A1746552618;52619;52620 chr2:178591722;178591721;178591720chr2:179456449;179456448;179456447
N2B1096833127;33128;33129 chr2:178591722;178591721;178591720chr2:179456449;179456448;179456447
Novex-11109333502;33503;33504 chr2:178591722;178591721;178591720chr2:179456449;179456448;179456447
Novex-21116033703;33704;33705 chr2:178591722;178591721;178591720chr2:179456449;179456448;179456447
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTA
  • RefSeq wild type template codon: AAT
  • Domain: Fn3-33
  • Domain position: 57
  • Structural Position: 89
  • Q(SASA): 0.2662
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs878993043 -0.923 0.946 N 0.428 0.123 None gnomAD-2.1.1 8.05E-06 None None None None N None 0 0 None 0 0 None 0 None 0 1.78E-05 0
L/V rs878993043 -0.923 0.946 N 0.428 0.123 None gnomAD-3.1.2 2.63E-05 None None None None N None 0 0 0 0 0 None 0 0 5.89E-05 0 0
L/V rs878993043 -0.923 0.946 N 0.428 0.123 None gnomAD-4.0.0 1.02556E-05 None None None None N None 0 0 None 0 0 None 0 0 1.67605E-05 0 2.84495E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2354 likely_benign 0.26 benign -1.957 Destabilizing 0.825 D 0.463 neutral None None None None N
L/C 0.3873 ambiguous 0.4274 ambiguous -1.056 Destabilizing 0.999 D 0.625 neutral None None None None N
L/D 0.6835 likely_pathogenic 0.7469 pathogenic -2.129 Highly Destabilizing 0.988 D 0.661 neutral None None None None N
L/E 0.3418 ambiguous 0.3905 ambiguous -1.959 Destabilizing 0.976 D 0.643 neutral None None None None N
L/F 0.2925 likely_benign 0.3084 benign -1.18 Destabilizing 0.995 D 0.52 neutral N 0.492545781 None None N
L/G 0.4616 ambiguous 0.5056 ambiguous -2.421 Highly Destabilizing 0.976 D 0.643 neutral None None None None N
L/H 0.3026 likely_benign 0.3301 benign -1.756 Destabilizing 0.999 D 0.699 prob.neutral None None None None N
L/I 0.1708 likely_benign 0.1852 benign -0.657 Destabilizing 0.946 D 0.403 neutral N 0.473439945 None None N
L/K 0.2208 likely_benign 0.2418 benign -1.456 Destabilizing 0.976 D 0.614 neutral None None None None N
L/M 0.1046 likely_benign 0.1107 benign -0.476 Destabilizing 0.996 D 0.547 neutral None None None None N
L/N 0.2951 likely_benign 0.3467 ambiguous -1.678 Destabilizing 0.988 D 0.685 prob.neutral None None None None N
L/P 0.1635 likely_benign 0.2119 benign -1.068 Destabilizing 0.005 N 0.517 neutral None None None None N
L/Q 0.1566 likely_benign 0.1669 benign -1.64 Destabilizing 0.988 D 0.648 neutral None None None None N
L/R 0.1743 likely_benign 0.1815 benign -1.077 Destabilizing 0.988 D 0.649 neutral None None None None N
L/S 0.2787 likely_benign 0.3223 benign -2.292 Highly Destabilizing 0.896 D 0.593 neutral N 0.45535283 None None N
L/T 0.1048 likely_benign 0.1194 benign -1.99 Destabilizing 0.919 D 0.525 neutral None None None None N
L/V 0.1257 likely_benign 0.1346 benign -1.068 Destabilizing 0.946 D 0.428 neutral N 0.464569746 None None N
L/W 0.4039 ambiguous 0.4284 ambiguous -1.527 Destabilizing 0.999 D 0.675 neutral None None None None N
L/Y 0.4759 ambiguous 0.504 ambiguous -1.174 Destabilizing 0.996 D 0.623 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.