Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20042 | 60349;60350;60351 | chr2:178591695;178591694;178591693 | chr2:179456422;179456421;179456420 |
N2AB | 18401 | 55426;55427;55428 | chr2:178591695;178591694;178591693 | chr2:179456422;179456421;179456420 |
N2A | 17474 | 52645;52646;52647 | chr2:178591695;178591694;178591693 | chr2:179456422;179456421;179456420 |
N2B | 10977 | 33154;33155;33156 | chr2:178591695;178591694;178591693 | chr2:179456422;179456421;179456420 |
Novex-1 | 11102 | 33529;33530;33531 | chr2:178591695;178591694;178591693 | chr2:179456422;179456421;179456420 |
Novex-2 | 11169 | 33730;33731;33732 | chr2:178591695;178591694;178591693 | chr2:179456422;179456421;179456420 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.006 | N | 0.189 | 0.136 | 0.321951552304 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1682 | likely_benign | 0.1484 | benign | -0.273 | Destabilizing | 0.495 | N | 0.313 | neutral | None | None | None | None | N |
Q/C | 0.74 | likely_pathogenic | 0.7304 | pathogenic | 0.242 | Stabilizing | 0.995 | D | 0.367 | neutral | None | None | None | None | N |
Q/D | 0.4311 | ambiguous | 0.456 | ambiguous | -0.085 | Destabilizing | 0.003 | N | 0.075 | neutral | None | None | None | None | N |
Q/E | 0.0655 | likely_benign | 0.0658 | benign | -0.107 | Destabilizing | 0.003 | N | 0.043 | neutral | N | 0.324385713 | None | None | N |
Q/F | 0.8051 | likely_pathogenic | 0.7926 | pathogenic | -0.415 | Destabilizing | 0.944 | D | 0.405 | neutral | None | None | None | None | N |
Q/G | 0.3385 | likely_benign | 0.3126 | benign | -0.483 | Destabilizing | 0.495 | N | 0.299 | neutral | None | None | None | None | N |
Q/H | 0.2869 | likely_benign | 0.2766 | benign | -0.424 | Destabilizing | 0.006 | N | 0.189 | neutral | N | 0.455392902 | None | None | N |
Q/I | 0.4519 | ambiguous | 0.4288 | ambiguous | 0.197 | Stabilizing | 0.944 | D | 0.447 | neutral | None | None | None | None | N |
Q/K | 0.1072 | likely_benign | 0.1034 | benign | 0.049 | Stabilizing | 0.002 | N | 0.073 | neutral | N | 0.434150839 | None | None | N |
Q/L | 0.2201 | likely_benign | 0.2097 | benign | 0.197 | Stabilizing | 0.642 | D | 0.385 | neutral | N | 0.461953515 | None | None | N |
Q/M | 0.3791 | ambiguous | 0.3647 | ambiguous | 0.561 | Stabilizing | 0.981 | D | 0.415 | neutral | None | None | None | None | N |
Q/N | 0.312 | likely_benign | 0.3237 | benign | -0.25 | Destabilizing | 0.495 | N | 0.347 | neutral | None | None | None | None | N |
Q/P | 0.1098 | likely_benign | 0.1069 | benign | 0.07 | Stabilizing | 0.784 | D | 0.447 | neutral | N | 0.347440639 | None | None | N |
Q/R | 0.1556 | likely_benign | 0.1459 | benign | 0.217 | Stabilizing | 0.473 | N | 0.365 | neutral | N | 0.436460425 | None | None | N |
Q/S | 0.2489 | likely_benign | 0.2373 | benign | -0.272 | Destabilizing | 0.495 | N | 0.37 | neutral | None | None | None | None | N |
Q/T | 0.2361 | likely_benign | 0.2148 | benign | -0.136 | Destabilizing | 0.704 | D | 0.327 | neutral | None | None | None | None | N |
Q/V | 0.278 | likely_benign | 0.2573 | benign | 0.07 | Stabilizing | 0.828 | D | 0.409 | neutral | None | None | None | None | N |
Q/W | 0.7384 | likely_pathogenic | 0.7297 | pathogenic | -0.36 | Destabilizing | 0.995 | D | 0.382 | neutral | None | None | None | None | N |
Q/Y | 0.6153 | likely_pathogenic | 0.5986 | pathogenic | -0.118 | Destabilizing | 0.893 | D | 0.429 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.