Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20044 | 60355;60356;60357 | chr2:178591689;178591688;178591687 | chr2:179456416;179456415;179456414 |
N2AB | 18403 | 55432;55433;55434 | chr2:178591689;178591688;178591687 | chr2:179456416;179456415;179456414 |
N2A | 17476 | 52651;52652;52653 | chr2:178591689;178591688;178591687 | chr2:179456416;179456415;179456414 |
N2B | 10979 | 33160;33161;33162 | chr2:178591689;178591688;178591687 | chr2:179456416;179456415;179456414 |
Novex-1 | 11104 | 33535;33536;33537 | chr2:178591689;178591688;178591687 | chr2:179456416;179456415;179456414 |
Novex-2 | 11171 | 33736;33737;33738 | chr2:178591689;178591688;178591687 | chr2:179456416;179456415;179456414 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1223532991 | -0.229 | 0.999 | N | 0.527 | 0.382 | 0.258779203287 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/E | rs1223532991 | -0.229 | 0.999 | N | 0.527 | 0.382 | 0.258779203287 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85961E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4754 | ambiguous | 0.4538 | ambiguous | -0.718 | Destabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | N |
K/C | 0.6627 | likely_pathogenic | 0.678 | pathogenic | -0.513 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/D | 0.7283 | likely_pathogenic | 0.7268 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
K/E | 0.2593 | likely_benign | 0.2533 | benign | -0.336 | Destabilizing | 0.999 | D | 0.527 | neutral | N | 0.443559756 | None | None | N |
K/F | 0.8314 | likely_pathogenic | 0.8245 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/G | 0.5801 | likely_pathogenic | 0.5698 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
K/H | 0.3122 | likely_benign | 0.3189 | benign | -1.458 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/I | 0.5076 | ambiguous | 0.4678 | ambiguous | 0.335 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/L | 0.4797 | ambiguous | 0.4802 | ambiguous | 0.335 | Stabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
K/M | 0.2637 | likely_benign | 0.2628 | benign | 0.251 | Stabilizing | 1.0 | D | 0.647 | neutral | N | 0.483771582 | None | None | N |
K/N | 0.4347 | ambiguous | 0.4252 | ambiguous | -0.665 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.465263179 | None | None | N |
K/P | 0.9818 | likely_pathogenic | 0.9836 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
K/Q | 0.14 | likely_benign | 0.1359 | benign | -0.669 | Destabilizing | 1.0 | D | 0.639 | neutral | N | 0.466263257 | None | None | N |
K/R | 0.0937 | likely_benign | 0.095 | benign | -0.823 | Destabilizing | 0.999 | D | 0.536 | neutral | N | 0.465953826 | None | None | N |
K/S | 0.4939 | ambiguous | 0.4646 | ambiguous | -1.241 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
K/T | 0.264 | likely_benign | 0.2444 | benign | -0.9 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.408420101 | None | None | N |
K/V | 0.4201 | ambiguous | 0.3904 | ambiguous | 0.014 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/W | 0.8647 | likely_pathogenic | 0.8647 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/Y | 0.7112 | likely_pathogenic | 0.7186 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.