Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20053 | 60382;60383;60384 | chr2:178591662;178591661;178591660 | chr2:179456389;179456388;179456387 |
N2AB | 18412 | 55459;55460;55461 | chr2:178591662;178591661;178591660 | chr2:179456389;179456388;179456387 |
N2A | 17485 | 52678;52679;52680 | chr2:178591662;178591661;178591660 | chr2:179456389;179456388;179456387 |
N2B | 10988 | 33187;33188;33189 | chr2:178591662;178591661;178591660 | chr2:179456389;179456388;179456387 |
Novex-1 | 11113 | 33562;33563;33564 | chr2:178591662;178591661;178591660 | chr2:179456389;179456388;179456387 |
Novex-2 | 11180 | 33763;33764;33765 | chr2:178591662;178591661;178591660 | chr2:179456389;179456388;179456387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.505 | N | 0.657 | 0.341 | 0.470810165807 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2546 | likely_benign | 0.2769 | benign | -0.87 | Destabilizing | 0.338 | N | 0.553 | neutral | N | 0.464511031 | None | None | I |
E/C | 0.8583 | likely_pathogenic | 0.8774 | pathogenic | -0.441 | Destabilizing | 0.991 | D | 0.768 | deleterious | None | None | None | None | I |
E/D | 0.6498 | likely_pathogenic | 0.723 | pathogenic | -1.28 | Destabilizing | 0.296 | N | 0.441 | neutral | N | 0.477787566 | None | None | I |
E/F | 0.8837 | likely_pathogenic | 0.8998 | pathogenic | -0.882 | Destabilizing | 0.967 | D | 0.795 | deleterious | None | None | None | None | I |
E/G | 0.399 | ambiguous | 0.4503 | ambiguous | -1.202 | Destabilizing | 0.505 | D | 0.657 | neutral | N | 0.472191705 | None | None | I |
E/H | 0.626 | likely_pathogenic | 0.6826 | pathogenic | -1.163 | Destabilizing | 0.826 | D | 0.574 | neutral | None | None | None | None | I |
E/I | 0.4352 | ambiguous | 0.4688 | ambiguous | 0.029 | Stabilizing | 0.906 | D | 0.805 | deleterious | None | None | None | None | I |
E/K | 0.1541 | likely_benign | 0.1727 | benign | -0.543 | Destabilizing | 0.174 | N | 0.479 | neutral | N | 0.492140349 | None | None | I |
E/L | 0.5189 | ambiguous | 0.5692 | pathogenic | 0.029 | Stabilizing | 0.575 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/M | 0.474 | ambiguous | 0.5039 | ambiguous | 0.573 | Stabilizing | 0.973 | D | 0.77 | deleterious | None | None | None | None | I |
E/N | 0.6147 | likely_pathogenic | 0.6818 | pathogenic | -0.885 | Destabilizing | 0.575 | D | 0.535 | neutral | None | None | None | None | I |
E/P | 0.9872 | likely_pathogenic | 0.9912 | pathogenic | -0.25 | Destabilizing | 0.906 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/Q | 0.0895 | likely_benign | 0.0953 | benign | -0.789 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.481115279 | None | None | I |
E/R | 0.2595 | likely_benign | 0.3005 | benign | -0.495 | Destabilizing | 0.404 | N | 0.519 | neutral | None | None | None | None | I |
E/S | 0.3833 | ambiguous | 0.4267 | ambiguous | -1.264 | Destabilizing | 0.404 | N | 0.461 | neutral | None | None | None | None | I |
E/T | 0.3308 | likely_benign | 0.3773 | ambiguous | -0.972 | Destabilizing | 0.575 | D | 0.643 | neutral | None | None | None | None | I |
E/V | 0.2745 | likely_benign | 0.2913 | benign | -0.25 | Destabilizing | 0.782 | D | 0.703 | prob.neutral | N | 0.407900026 | None | None | I |
E/W | 0.9496 | likely_pathogenic | 0.9598 | pathogenic | -0.823 | Destabilizing | 0.991 | D | 0.767 | deleterious | None | None | None | None | I |
E/Y | 0.7974 | likely_pathogenic | 0.8357 | pathogenic | -0.64 | Destabilizing | 0.906 | D | 0.789 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.