Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20058 | 60397;60398;60399 | chr2:178591647;178591646;178591645 | chr2:179456374;179456373;179456372 |
N2AB | 18417 | 55474;55475;55476 | chr2:178591647;178591646;178591645 | chr2:179456374;179456373;179456372 |
N2A | 17490 | 52693;52694;52695 | chr2:178591647;178591646;178591645 | chr2:179456374;179456373;179456372 |
N2B | 10993 | 33202;33203;33204 | chr2:178591647;178591646;178591645 | chr2:179456374;179456373;179456372 |
Novex-1 | 11118 | 33577;33578;33579 | chr2:178591647;178591646;178591645 | chr2:179456374;179456373;179456372 |
Novex-2 | 11185 | 33778;33779;33780 | chr2:178591647;178591646;178591645 | chr2:179456374;179456373;179456372 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2050227759 | None | 1.0 | N | 0.786 | 0.286 | 0.473774312618 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1961 | likely_benign | 0.1793 | benign | -1.286 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/C | 0.4793 | ambiguous | 0.4919 | ambiguous | -0.791 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
L/D | 0.6268 | likely_pathogenic | 0.6353 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
L/E | 0.3037 | likely_benign | 0.2971 | benign | -0.652 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
L/F | 0.171 | likely_benign | 0.1721 | benign | -1.055 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.496620662 | None | None | I |
L/G | 0.5538 | ambiguous | 0.5483 | ambiguous | -1.53 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
L/H | 0.2702 | likely_benign | 0.2703 | benign | -0.658 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.468073421 | None | None | I |
L/I | 0.0975 | likely_benign | 0.1006 | benign | -0.728 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.45038694 | None | None | I |
L/K | 0.2607 | likely_benign | 0.2573 | benign | -0.724 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
L/M | 0.1215 | likely_benign | 0.1211 | benign | -0.545 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
L/N | 0.3686 | ambiguous | 0.3807 | ambiguous | -0.44 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
L/P | 0.2035 | likely_benign | 0.1868 | benign | -0.881 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.459006424 | None | None | I |
L/Q | 0.174 | likely_benign | 0.1604 | benign | -0.705 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
L/R | 0.2253 | likely_benign | 0.2201 | benign | -0.066 | Destabilizing | 1.0 | D | 0.821 | deleterious | N | 0.466087112 | None | None | I |
L/S | 0.2645 | likely_benign | 0.2649 | benign | -1.018 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
L/T | 0.1614 | likely_benign | 0.1599 | benign | -0.967 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
L/V | 0.0953 | likely_benign | 0.0913 | benign | -0.881 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.427606081 | None | None | I |
L/W | 0.299 | likely_benign | 0.3169 | benign | -1.018 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
L/Y | 0.3926 | ambiguous | 0.3946 | ambiguous | -0.808 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.