Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20061 | 60406;60407;60408 | chr2:178591638;178591637;178591636 | chr2:179456365;179456364;179456363 |
N2AB | 18420 | 55483;55484;55485 | chr2:178591638;178591637;178591636 | chr2:179456365;179456364;179456363 |
N2A | 17493 | 52702;52703;52704 | chr2:178591638;178591637;178591636 | chr2:179456365;179456364;179456363 |
N2B | 10996 | 33211;33212;33213 | chr2:178591638;178591637;178591636 | chr2:179456365;179456364;179456363 |
Novex-1 | 11121 | 33586;33587;33588 | chr2:178591638;178591637;178591636 | chr2:179456365;179456364;179456363 |
Novex-2 | 11188 | 33787;33788;33789 | chr2:178591638;178591637;178591636 | chr2:179456365;179456364;179456363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.777 | 0.482 | 0.745533171595 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2132 | likely_benign | 0.226 | benign | -1.637 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.467023464 | None | None | I |
P/C | 0.8626 | likely_pathogenic | 0.8966 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/D | 0.9573 | likely_pathogenic | 0.9648 | pathogenic | -1.684 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
P/E | 0.8924 | likely_pathogenic | 0.8935 | pathogenic | -1.703 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/F | 0.903 | likely_pathogenic | 0.9252 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
P/G | 0.7953 | likely_pathogenic | 0.8038 | pathogenic | -1.932 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
P/H | 0.7624 | likely_pathogenic | 0.8059 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.50525989 | None | None | I |
P/I | 0.8971 | likely_pathogenic | 0.9083 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
P/K | 0.947 | likely_pathogenic | 0.9465 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/L | 0.697 | likely_pathogenic | 0.7 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.505687509 | None | None | I |
P/M | 0.8706 | likely_pathogenic | 0.8823 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
P/N | 0.9435 | likely_pathogenic | 0.9547 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
P/Q | 0.7919 | likely_pathogenic | 0.8005 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/R | 0.8663 | likely_pathogenic | 0.8651 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.510829297 | None | None | I |
P/S | 0.5136 | ambiguous | 0.5697 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.489749301 | None | None | I |
P/T | 0.5642 | likely_pathogenic | 0.5997 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.511082787 | None | None | I |
P/V | 0.762 | likely_pathogenic | 0.7678 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
P/W | 0.9071 | likely_pathogenic | 0.9394 | pathogenic | -1.466 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
P/Y | 0.8912 | likely_pathogenic | 0.9127 | pathogenic | -1.221 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.