Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20065 | 60418;60419;60420 | chr2:178591626;178591625;178591624 | chr2:179456353;179456352;179456351 |
N2AB | 18424 | 55495;55496;55497 | chr2:178591626;178591625;178591624 | chr2:179456353;179456352;179456351 |
N2A | 17497 | 52714;52715;52716 | chr2:178591626;178591625;178591624 | chr2:179456353;179456352;179456351 |
N2B | 11000 | 33223;33224;33225 | chr2:178591626;178591625;178591624 | chr2:179456353;179456352;179456351 |
Novex-1 | 11125 | 33598;33599;33600 | chr2:178591626;178591625;178591624 | chr2:179456353;179456352;179456351 |
Novex-2 | 11192 | 33799;33800;33801 | chr2:178591626;178591625;178591624 | chr2:179456353;179456352;179456351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.001 | N | 0.117 | 0.118 | 0.369867359543 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86008E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4231 | ambiguous | 0.4404 | ambiguous | -0.825 | Destabilizing | 0.338 | N | 0.334 | neutral | None | None | None | None | I |
I/C | 0.8176 | likely_pathogenic | 0.8446 | pathogenic | -0.636 | Destabilizing | 0.995 | D | 0.349 | neutral | None | None | None | None | I |
I/D | 0.7414 | likely_pathogenic | 0.7471 | pathogenic | -0.669 | Destabilizing | 0.982 | D | 0.543 | neutral | None | None | None | None | I |
I/E | 0.6326 | likely_pathogenic | 0.6398 | pathogenic | -0.747 | Destabilizing | 0.946 | D | 0.481 | neutral | None | None | None | None | I |
I/F | 0.2314 | likely_benign | 0.2349 | benign | -0.767 | Destabilizing | 0.868 | D | 0.355 | neutral | N | 0.465529751 | None | None | I |
I/G | 0.7066 | likely_pathogenic | 0.7231 | pathogenic | -1.01 | Destabilizing | 0.946 | D | 0.477 | neutral | None | None | None | None | I |
I/H | 0.6518 | likely_pathogenic | 0.6518 | pathogenic | -0.244 | Destabilizing | 0.995 | D | 0.459 | neutral | None | None | None | None | I |
I/K | 0.4806 | ambiguous | 0.4747 | ambiguous | -0.604 | Destabilizing | 0.946 | D | 0.483 | neutral | None | None | None | None | I |
I/L | 0.1188 | likely_benign | 0.1136 | benign | -0.443 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.394666944 | None | None | I |
I/M | 0.1445 | likely_benign | 0.1417 | benign | -0.497 | Destabilizing | 0.868 | D | 0.474 | neutral | N | 0.455102114 | None | None | I |
I/N | 0.3876 | ambiguous | 0.3875 | ambiguous | -0.394 | Destabilizing | 0.976 | D | 0.497 | neutral | N | 0.484635587 | None | None | I |
I/P | 0.7022 | likely_pathogenic | 0.7199 | pathogenic | -0.539 | Destabilizing | 0.982 | D | 0.536 | neutral | None | None | None | None | I |
I/Q | 0.5359 | ambiguous | 0.54 | ambiguous | -0.63 | Destabilizing | 0.982 | D | 0.483 | neutral | None | None | None | None | I |
I/R | 0.4418 | ambiguous | 0.4409 | ambiguous | 0.018 | Stabilizing | 0.982 | D | 0.515 | neutral | None | None | None | None | I |
I/S | 0.3727 | ambiguous | 0.3886 | ambiguous | -0.789 | Destabilizing | 0.93 | D | 0.446 | neutral | N | 0.363037315 | None | None | I |
I/T | 0.3502 | ambiguous | 0.3711 | ambiguous | -0.761 | Destabilizing | 0.651 | D | 0.303 | neutral | N | 0.410348472 | None | None | I |
I/V | 0.08 | likely_benign | 0.0812 | benign | -0.539 | Destabilizing | 0.002 | N | 0.132 | neutral | N | 0.340851101 | None | None | I |
I/W | 0.8604 | likely_pathogenic | 0.8556 | pathogenic | -0.793 | Destabilizing | 0.995 | D | 0.539 | neutral | None | None | None | None | I |
I/Y | 0.6176 | likely_pathogenic | 0.6405 | pathogenic | -0.562 | Destabilizing | 0.982 | D | 0.4 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.