Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20068 | 60427;60428;60429 | chr2:178591617;178591616;178591615 | chr2:179456344;179456343;179456342 |
N2AB | 18427 | 55504;55505;55506 | chr2:178591617;178591616;178591615 | chr2:179456344;179456343;179456342 |
N2A | 17500 | 52723;52724;52725 | chr2:178591617;178591616;178591615 | chr2:179456344;179456343;179456342 |
N2B | 11003 | 33232;33233;33234 | chr2:178591617;178591616;178591615 | chr2:179456344;179456343;179456342 |
Novex-1 | 11128 | 33607;33608;33609 | chr2:178591617;178591616;178591615 | chr2:179456344;179456343;179456342 |
Novex-2 | 11195 | 33808;33809;33810 | chr2:178591617;178591616;178591615 | chr2:179456344;179456343;179456342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs774629592 | -0.297 | 0.971 | N | 0.451 | 0.164 | 0.267299060538 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs774629592 | -0.297 | 0.971 | N | 0.451 | 0.164 | 0.267299060538 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs774629592 | -0.297 | 0.971 | N | 0.451 | 0.164 | 0.267299060538 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | N | None | 2.41278E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs759291854 | 0.469 | 0.971 | N | 0.427 | 0.276 | 0.28722502521 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 0 | 0 |
E/K | rs759291854 | 0.469 | 0.971 | N | 0.427 | 0.276 | 0.28722502521 | gnomAD-4.0.0 | 2.05446E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79957E-06 | 1.16705E-05 | 0 |
E/Q | rs759291854 | 0.059 | 0.971 | N | 0.511 | 0.243 | 0.329282125956 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs759291854 | 0.059 | 0.971 | N | 0.511 | 0.243 | 0.329282125956 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs759291854 | 0.059 | 0.971 | N | 0.511 | 0.243 | 0.329282125956 | gnomAD-4.0.0 | 2.6303E-05 | None | None | None | None | N | None | 9.65298E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1251 | likely_benign | 0.1411 | benign | -0.609 | Destabilizing | 0.817 | D | 0.461 | neutral | N | 0.37012915 | None | None | N |
E/C | 0.7953 | likely_pathogenic | 0.8534 | pathogenic | -0.079 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
E/D | 0.2617 | likely_benign | 0.2767 | benign | -0.531 | Destabilizing | 0.971 | D | 0.451 | neutral | N | 0.426675867 | None | None | N |
E/F | 0.6811 | likely_pathogenic | 0.7492 | pathogenic | -0.487 | Destabilizing | 0.961 | D | 0.543 | neutral | None | None | None | None | N |
E/G | 0.2998 | likely_benign | 0.3455 | ambiguous | -0.843 | Destabilizing | 0.971 | D | 0.492 | neutral | N | 0.427542658 | None | None | N |
E/H | 0.4402 | ambiguous | 0.5144 | ambiguous | -0.469 | Destabilizing | 0.998 | D | 0.41 | neutral | None | None | None | None | N |
E/I | 0.1733 | likely_benign | 0.2055 | benign | -0.015 | Destabilizing | 0.78 | D | 0.521 | neutral | None | None | None | None | N |
E/K | 0.1345 | likely_benign | 0.1612 | benign | 0.122 | Stabilizing | 0.971 | D | 0.427 | neutral | N | 0.425462358 | None | None | N |
E/L | 0.2413 | likely_benign | 0.2855 | benign | -0.015 | Destabilizing | 0.003 | N | 0.372 | neutral | None | None | None | None | N |
E/M | 0.3413 | ambiguous | 0.3817 | ambiguous | 0.268 | Stabilizing | 0.961 | D | 0.541 | neutral | None | None | None | None | N |
E/N | 0.3123 | likely_benign | 0.3467 | ambiguous | -0.206 | Destabilizing | 0.994 | D | 0.421 | neutral | None | None | None | None | N |
E/P | 0.5377 | ambiguous | 0.5916 | pathogenic | -0.193 | Destabilizing | 0.994 | D | 0.487 | neutral | None | None | None | None | N |
E/Q | 0.1124 | likely_benign | 0.1279 | benign | -0.172 | Destabilizing | 0.971 | D | 0.511 | neutral | N | 0.42632915 | None | None | N |
E/R | 0.2378 | likely_benign | 0.2904 | benign | 0.289 | Stabilizing | 0.994 | D | 0.403 | neutral | None | None | None | None | N |
E/S | 0.227 | likely_benign | 0.255 | benign | -0.401 | Destabilizing | 0.978 | D | 0.325 | neutral | None | None | None | None | N |
E/T | 0.1354 | likely_benign | 0.1554 | benign | -0.212 | Destabilizing | 0.935 | D | 0.503 | neutral | None | None | None | None | N |
E/V | 0.1127 | likely_benign | 0.1319 | benign | -0.193 | Destabilizing | 0.728 | D | 0.471 | neutral | N | 0.426675867 | None | None | N |
E/W | 0.9204 | likely_pathogenic | 0.9438 | pathogenic | -0.309 | Destabilizing | 0.998 | D | 0.656 | prob.neutral | None | None | None | None | N |
E/Y | 0.6175 | likely_pathogenic | 0.6999 | pathogenic | -0.24 | Destabilizing | 0.994 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.