Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20070 | 60433;60434;60435 | chr2:178591611;178591610;178591609 | chr2:179456338;179456337;179456336 |
N2AB | 18429 | 55510;55511;55512 | chr2:178591611;178591610;178591609 | chr2:179456338;179456337;179456336 |
N2A | 17502 | 52729;52730;52731 | chr2:178591611;178591610;178591609 | chr2:179456338;179456337;179456336 |
N2B | 11005 | 33238;33239;33240 | chr2:178591611;178591610;178591609 | chr2:179456338;179456337;179456336 |
Novex-1 | 11130 | 33613;33614;33615 | chr2:178591611;178591610;178591609 | chr2:179456338;179456337;179456336 |
Novex-2 | 11197 | 33814;33815;33816 | chr2:178591611;178591610;178591609 | chr2:179456338;179456337;179456336 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1204026103 | None | 0.998 | N | 0.499 | 0.172 | 0.348764635752 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3385 | likely_benign | 0.3017 | benign | -0.265 | Destabilizing | 0.994 | D | 0.451 | neutral | None | None | None | None | N |
Q/C | 0.6978 | likely_pathogenic | 0.7103 | pathogenic | 0.264 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Q/D | 0.6616 | likely_pathogenic | 0.6422 | pathogenic | -0.225 | Destabilizing | 0.994 | D | 0.555 | neutral | None | None | None | None | N |
Q/E | 0.112 | likely_benign | 0.1074 | benign | -0.23 | Destabilizing | 0.982 | D | 0.44 | neutral | N | 0.467925056 | None | None | N |
Q/F | 0.7937 | likely_pathogenic | 0.7902 | pathogenic | -0.276 | Destabilizing | 0.998 | D | 0.739 | deleterious | None | None | None | None | N |
Q/G | 0.4287 | ambiguous | 0.3952 | ambiguous | -0.511 | Destabilizing | 0.994 | D | 0.512 | neutral | None | None | None | None | N |
Q/H | 0.2743 | likely_benign | 0.2625 | benign | -0.481 | Destabilizing | 0.998 | D | 0.499 | neutral | N | 0.505926084 | None | None | N |
Q/I | 0.4352 | ambiguous | 0.4223 | ambiguous | 0.31 | Stabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
Q/K | 0.0859 | likely_benign | 0.0794 | benign | -0.11 | Destabilizing | 0.993 | D | 0.401 | neutral | N | 0.421189902 | None | None | N |
Q/L | 0.1988 | likely_benign | 0.1974 | benign | 0.31 | Stabilizing | 0.993 | D | 0.512 | neutral | N | 0.497941319 | None | None | N |
Q/M | 0.4532 | ambiguous | 0.4301 | ambiguous | 0.651 | Stabilizing | 0.998 | D | 0.504 | neutral | None | None | None | None | N |
Q/N | 0.48 | ambiguous | 0.4538 | ambiguous | -0.349 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | N |
Q/P | 0.7273 | likely_pathogenic | 0.7096 | pathogenic | 0.148 | Stabilizing | 0.998 | D | 0.603 | neutral | N | 0.505926084 | None | None | N |
Q/R | 0.0969 | likely_benign | 0.0902 | benign | 0.041 | Stabilizing | 0.993 | D | 0.54 | neutral | N | 0.442874683 | None | None | N |
Q/S | 0.3933 | ambiguous | 0.3698 | ambiguous | -0.368 | Destabilizing | 0.994 | D | 0.419 | neutral | None | None | None | None | N |
Q/T | 0.2587 | likely_benign | 0.24 | benign | -0.215 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
Q/V | 0.2749 | likely_benign | 0.2609 | benign | 0.148 | Stabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | N |
Q/W | 0.6857 | likely_pathogenic | 0.6739 | pathogenic | -0.225 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
Q/Y | 0.6309 | likely_pathogenic | 0.6193 | pathogenic | -0.002 | Destabilizing | 0.998 | D | 0.526 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.