Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20080 | 60463;60464;60465 | chr2:178591487;178591486;178591485 | chr2:179456214;179456213;179456212 |
N2AB | 18439 | 55540;55541;55542 | chr2:178591487;178591486;178591485 | chr2:179456214;179456213;179456212 |
N2A | 17512 | 52759;52760;52761 | chr2:178591487;178591486;178591485 | chr2:179456214;179456213;179456212 |
N2B | 11015 | 33268;33269;33270 | chr2:178591487;178591486;178591485 | chr2:179456214;179456213;179456212 |
Novex-1 | 11140 | 33643;33644;33645 | chr2:178591487;178591486;178591485 | chr2:179456214;179456213;179456212 |
Novex-2 | 11207 | 33844;33845;33846 | chr2:178591487;178591486;178591485 | chr2:179456214;179456213;179456212 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1559592788 | None | 0.003 | N | 0.211 | 0.111 | 0.209622950755 | gnomAD-2.1.1 | 4.44E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.42E-06 | 0 |
L/V | rs1559592788 | None | 0.003 | N | 0.211 | 0.111 | 0.209622950755 | gnomAD-4.0.0 | 2.78783E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71797E-06 | 1.23907E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.835 | likely_pathogenic | 0.8407 | pathogenic | -1.699 | Destabilizing | 0.415 | N | 0.431 | neutral | None | None | None | None | N |
L/C | 0.9094 | likely_pathogenic | 0.9184 | pathogenic | -1.133 | Destabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | N |
L/D | 0.9939 | likely_pathogenic | 0.9918 | pathogenic | -1.298 | Destabilizing | 0.987 | D | 0.553 | neutral | None | None | None | None | N |
L/E | 0.9696 | likely_pathogenic | 0.9662 | pathogenic | -1.217 | Destabilizing | 0.961 | D | 0.535 | neutral | None | None | None | None | N |
L/F | 0.565 | likely_pathogenic | 0.5521 | ambiguous | -0.992 | Destabilizing | 0.923 | D | 0.537 | neutral | None | None | None | None | N |
L/G | 0.9687 | likely_pathogenic | 0.9636 | pathogenic | -2.08 | Highly Destabilizing | 0.961 | D | 0.535 | neutral | None | None | None | None | N |
L/H | 0.9594 | likely_pathogenic | 0.9524 | pathogenic | -1.226 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
L/I | 0.1424 | likely_benign | 0.176 | benign | -0.685 | Destabilizing | 0.008 | N | 0.203 | neutral | N | 0.444778838 | None | None | N |
L/K | 0.9489 | likely_pathogenic | 0.9365 | pathogenic | -1.336 | Destabilizing | 0.961 | D | 0.502 | neutral | None | None | None | None | N |
L/M | 0.1869 | likely_benign | 0.2021 | benign | -0.669 | Destabilizing | 0.923 | D | 0.573 | neutral | None | None | None | None | N |
L/N | 0.9673 | likely_pathogenic | 0.9619 | pathogenic | -1.338 | Destabilizing | 0.987 | D | 0.568 | neutral | None | None | None | None | N |
L/P | 0.9209 | likely_pathogenic | 0.9128 | pathogenic | -0.995 | Destabilizing | 0.983 | D | 0.554 | neutral | N | 0.488905106 | None | None | N |
L/Q | 0.9218 | likely_pathogenic | 0.9187 | pathogenic | -1.37 | Destabilizing | 0.983 | D | 0.551 | neutral | N | 0.488651617 | None | None | N |
L/R | 0.9347 | likely_pathogenic | 0.9198 | pathogenic | -0.874 | Destabilizing | 0.983 | D | 0.532 | neutral | N | 0.487384169 | None | None | N |
L/S | 0.9645 | likely_pathogenic | 0.9611 | pathogenic | -1.945 | Destabilizing | 0.961 | D | 0.476 | neutral | None | None | None | None | N |
L/T | 0.7569 | likely_pathogenic | 0.7615 | pathogenic | -1.73 | Destabilizing | 0.775 | D | 0.47 | neutral | None | None | None | None | N |
L/V | 0.1658 | likely_benign | 0.2111 | benign | -0.995 | Destabilizing | 0.003 | N | 0.211 | neutral | N | 0.4567667 | None | None | N |
L/W | 0.8675 | likely_pathogenic | 0.8328 | pathogenic | -1.131 | Destabilizing | 0.996 | D | 0.585 | neutral | None | None | None | None | N |
L/Y | 0.9204 | likely_pathogenic | 0.9056 | pathogenic | -0.894 | Destabilizing | 0.961 | D | 0.531 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.