Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20097 | 60514;60515;60516 | chr2:178591436;178591435;178591434 | chr2:179456163;179456162;179456161 |
N2AB | 18456 | 55591;55592;55593 | chr2:178591436;178591435;178591434 | chr2:179456163;179456162;179456161 |
N2A | 17529 | 52810;52811;52812 | chr2:178591436;178591435;178591434 | chr2:179456163;179456162;179456161 |
N2B | 11032 | 33319;33320;33321 | chr2:178591436;178591435;178591434 | chr2:179456163;179456162;179456161 |
Novex-1 | 11157 | 33694;33695;33696 | chr2:178591436;178591435;178591434 | chr2:179456163;179456162;179456161 |
Novex-2 | 11224 | 33895;33896;33897 | chr2:178591436;178591435;178591434 | chr2:179456163;179456162;179456161 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.545 | 0.27 | 0.211220785272 | gnomAD-4.0.0 | 1.61338E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6184 | likely_pathogenic | 0.6273 | pathogenic | -0.464 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
R/C | 0.2082 | likely_benign | 0.2036 | benign | -0.539 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
R/D | 0.8346 | likely_pathogenic | 0.8208 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
R/E | 0.5723 | likely_pathogenic | 0.5449 | ambiguous | 0.205 | Stabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
R/F | 0.7173 | likely_pathogenic | 0.7106 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
R/G | 0.5756 | likely_pathogenic | 0.5869 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.485495069 | None | None | N |
R/H | 0.1159 | likely_benign | 0.1094 | benign | -1.124 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
R/I | 0.3119 | likely_benign | 0.299 | benign | 0.346 | Stabilizing | 1.0 | D | 0.741 | deleterious | N | 0.504172992 | None | None | N |
R/K | 0.1425 | likely_benign | 0.1313 | benign | -0.453 | Destabilizing | 0.997 | D | 0.545 | neutral | N | 0.450666581 | None | None | N |
R/L | 0.3544 | ambiguous | 0.3562 | ambiguous | 0.346 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/M | 0.4055 | ambiguous | 0.3978 | ambiguous | -0.169 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
R/N | 0.6883 | likely_pathogenic | 0.6728 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
R/P | 0.9275 | likely_pathogenic | 0.9252 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/Q | 0.1377 | likely_benign | 0.1337 | benign | -0.199 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
R/S | 0.6015 | likely_pathogenic | 0.6065 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.495361508 | None | None | N |
R/T | 0.2875 | likely_benign | 0.2806 | benign | -0.451 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.439177364 | None | None | N |
R/V | 0.385 | ambiguous | 0.3779 | ambiguous | 0.098 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/W | 0.3116 | likely_benign | 0.3022 | benign | -0.069 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
R/Y | 0.5255 | ambiguous | 0.4943 | ambiguous | 0.252 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.