Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20098 | 60517;60518;60519 | chr2:178591433;178591432;178591431 | chr2:179456160;179456159;179456158 |
N2AB | 18457 | 55594;55595;55596 | chr2:178591433;178591432;178591431 | chr2:179456160;179456159;179456158 |
N2A | 17530 | 52813;52814;52815 | chr2:178591433;178591432;178591431 | chr2:179456160;179456159;179456158 |
N2B | 11033 | 33322;33323;33324 | chr2:178591433;178591432;178591431 | chr2:179456160;179456159;179456158 |
Novex-1 | 11158 | 33697;33698;33699 | chr2:178591433;178591432;178591431 | chr2:179456160;179456159;179456158 |
Novex-2 | 11225 | 33898;33899;33900 | chr2:178591433;178591432;178591431 | chr2:179456160;179456159;179456158 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.784 | D | 0.716 | 0.679 | 0.727926503626 | gnomAD-4.0.0 | 2.75181E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52398E-05 | None | 0 | 0 | 2.7068E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.987 | likely_pathogenic | 0.9864 | pathogenic | -1.798 | Destabilizing | 0.495 | N | 0.671 | neutral | None | None | None | None | N |
F/C | 0.8424 | likely_pathogenic | 0.8334 | pathogenic | -1.49 | Destabilizing | 0.975 | D | 0.814 | deleterious | D | 0.559016335 | None | None | N |
F/D | 0.999 | likely_pathogenic | 0.9988 | pathogenic | -3.032 | Highly Destabilizing | 0.981 | D | 0.793 | deleterious | None | None | None | None | N |
F/E | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -2.819 | Highly Destabilizing | 0.936 | D | 0.763 | deleterious | None | None | None | None | N |
F/G | 0.9965 | likely_pathogenic | 0.9961 | pathogenic | -2.185 | Highly Destabilizing | 0.936 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/H | 0.9876 | likely_pathogenic | 0.985 | pathogenic | -1.91 | Destabilizing | 0.981 | D | 0.735 | prob.delet. | None | None | None | None | N |
F/I | 0.2688 | likely_benign | 0.2696 | benign | -0.532 | Destabilizing | 0.139 | N | 0.457 | neutral | N | 0.441640611 | None | None | N |
F/K | 0.9974 | likely_pathogenic | 0.9968 | pathogenic | -2.222 | Highly Destabilizing | 0.828 | D | 0.741 | deleterious | None | None | None | None | N |
F/L | 0.7264 | likely_pathogenic | 0.7418 | pathogenic | -0.532 | Destabilizing | 0.001 | N | 0.246 | neutral | N | 0.363013964 | None | None | N |
F/M | 0.64 | likely_pathogenic | 0.65 | pathogenic | -0.545 | Destabilizing | 0.893 | D | 0.655 | neutral | None | None | None | None | N |
F/N | 0.9952 | likely_pathogenic | 0.9944 | pathogenic | -2.945 | Highly Destabilizing | 0.981 | D | 0.803 | deleterious | None | None | None | None | N |
F/P | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -0.965 | Destabilizing | 0.981 | D | 0.802 | deleterious | None | None | None | None | N |
F/Q | 0.9955 | likely_pathogenic | 0.9947 | pathogenic | -2.595 | Highly Destabilizing | 0.981 | D | 0.815 | deleterious | None | None | None | None | N |
F/R | 0.9949 | likely_pathogenic | 0.9941 | pathogenic | -2.402 | Highly Destabilizing | 0.944 | D | 0.793 | deleterious | None | None | None | None | N |
F/S | 0.9929 | likely_pathogenic | 0.9921 | pathogenic | -3.18 | Highly Destabilizing | 0.784 | D | 0.716 | prob.delet. | D | 0.559016335 | None | None | N |
F/T | 0.9909 | likely_pathogenic | 0.9898 | pathogenic | -2.848 | Highly Destabilizing | 0.495 | N | 0.697 | prob.neutral | None | None | None | None | N |
F/V | 0.5152 | ambiguous | 0.5088 | ambiguous | -0.965 | Destabilizing | 0.01 | N | 0.483 | neutral | N | 0.47842813 | None | None | N |
F/W | 0.8962 | likely_pathogenic | 0.8893 | pathogenic | -0.447 | Destabilizing | 0.995 | D | 0.609 | neutral | None | None | None | None | N |
F/Y | 0.6075 | likely_pathogenic | 0.5801 | pathogenic | -0.728 | Destabilizing | 0.784 | D | 0.531 | neutral | D | 0.546775789 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.