Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20117 | 60574;60575;60576 | chr2:178591376;178591375;178591374 | chr2:179456103;179456102;179456101 |
N2AB | 18476 | 55651;55652;55653 | chr2:178591376;178591375;178591374 | chr2:179456103;179456102;179456101 |
N2A | 17549 | 52870;52871;52872 | chr2:178591376;178591375;178591374 | chr2:179456103;179456102;179456101 |
N2B | 11052 | 33379;33380;33381 | chr2:178591376;178591375;178591374 | chr2:179456103;179456102;179456101 |
Novex-1 | 11177 | 33754;33755;33756 | chr2:178591376;178591375;178591374 | chr2:179456103;179456102;179456101 |
Novex-2 | 11244 | 33955;33956;33957 | chr2:178591376;178591375;178591374 | chr2:179456103;179456102;179456101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs527297991 | None | 0.055 | N | 0.403 | 0.141 | 0.289098819767 | gnomAD-4.0.0 | 6.84563E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99912E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.066 | likely_benign | 0.0651 | benign | -0.294 | Destabilizing | 0.007 | N | 0.207 | neutral | None | None | None | None | N |
S/C | 0.0695 | likely_benign | 0.0749 | benign | -0.243 | Destabilizing | 0.295 | N | 0.331 | neutral | N | 0.488231359 | None | None | N |
S/D | 0.1525 | likely_benign | 0.1536 | benign | -0.033 | Destabilizing | 0.016 | N | 0.199 | neutral | None | None | None | None | N |
S/E | 0.1695 | likely_benign | 0.1726 | benign | -0.15 | Destabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
S/F | 0.0967 | likely_benign | 0.098 | benign | -1.027 | Destabilizing | 0.072 | N | 0.445 | neutral | None | None | None | None | N |
S/G | 0.0784 | likely_benign | 0.0793 | benign | -0.344 | Destabilizing | 0.012 | N | 0.223 | neutral | N | 0.443115117 | None | None | N |
S/H | 0.1176 | likely_benign | 0.1212 | benign | -0.832 | Destabilizing | 0.214 | N | 0.323 | neutral | None | None | None | None | N |
S/I | 0.0609 | likely_benign | 0.064 | benign | -0.291 | Destabilizing | None | N | 0.263 | neutral | N | 0.465567903 | None | None | N |
S/K | 0.163 | likely_benign | 0.1632 | benign | -0.405 | Destabilizing | 0.016 | N | 0.216 | neutral | None | None | None | None | N |
S/L | 0.0617 | likely_benign | 0.0633 | benign | -0.291 | Destabilizing | 0.002 | N | 0.261 | neutral | None | None | None | None | N |
S/M | 0.0919 | likely_benign | 0.0903 | benign | -0.023 | Destabilizing | 0.003 | N | 0.267 | neutral | None | None | None | None | N |
S/N | 0.0603 | likely_benign | 0.061 | benign | -0.111 | Destabilizing | None | N | 0.182 | neutral | N | 0.422393129 | None | None | N |
S/P | 0.447 | ambiguous | 0.443 | ambiguous | -0.268 | Destabilizing | 0.136 | N | 0.388 | neutral | None | None | None | None | N |
S/Q | 0.1573 | likely_benign | 0.1581 | benign | -0.398 | Destabilizing | 0.072 | N | 0.206 | neutral | None | None | None | None | N |
S/R | 0.152 | likely_benign | 0.156 | benign | -0.173 | Destabilizing | 0.055 | N | 0.403 | neutral | N | 0.425817436 | None | None | N |
S/T | 0.055 | likely_benign | 0.0558 | benign | -0.226 | Destabilizing | None | N | 0.122 | neutral | N | 0.453830756 | None | None | N |
S/V | 0.0733 | likely_benign | 0.075 | benign | -0.268 | Destabilizing | None | N | 0.201 | neutral | None | None | None | None | N |
S/W | 0.1874 | likely_benign | 0.1895 | benign | -1.067 | Destabilizing | 0.864 | D | 0.408 | neutral | None | None | None | None | N |
S/Y | 0.0973 | likely_benign | 0.0984 | benign | -0.773 | Destabilizing | 0.356 | N | 0.46 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.