Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20118 | 60577;60578;60579 | chr2:178591373;178591372;178591371 | chr2:179456100;179456099;179456098 |
N2AB | 18477 | 55654;55655;55656 | chr2:178591373;178591372;178591371 | chr2:179456100;179456099;179456098 |
N2A | 17550 | 52873;52874;52875 | chr2:178591373;178591372;178591371 | chr2:179456100;179456099;179456098 |
N2B | 11053 | 33382;33383;33384 | chr2:178591373;178591372;178591371 | chr2:179456100;179456099;179456098 |
Novex-1 | 11178 | 33757;33758;33759 | chr2:178591373;178591372;178591371 | chr2:179456100;179456099;179456098 |
Novex-2 | 11245 | 33958;33959;33960 | chr2:178591373;178591372;178591371 | chr2:179456100;179456099;179456098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.671 | 0.531 | 0.571137827458 | gnomAD-4.0.0 | 1.59228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86028E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1302 | likely_benign | 0.1299 | benign | -0.417 | Destabilizing | 0.999 | D | 0.654 | neutral | N | 0.510086684 | None | None | N |
E/C | 0.7634 | likely_pathogenic | 0.7792 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/D | 0.1078 | likely_benign | 0.1088 | benign | -0.405 | Destabilizing | 0.999 | D | 0.474 | neutral | N | 0.483092084 | None | None | N |
E/F | 0.6041 | likely_pathogenic | 0.6069 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/G | 0.1836 | likely_benign | 0.1857 | benign | -0.619 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.50290212 | None | None | N |
E/H | 0.4078 | ambiguous | 0.4103 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
E/I | 0.1714 | likely_benign | 0.1708 | benign | 0.083 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/K | 0.1501 | likely_benign | 0.1447 | benign | 0.26 | Stabilizing | 0.999 | D | 0.606 | neutral | D | 0.5262855 | None | None | N |
E/L | 0.2535 | likely_benign | 0.2513 | benign | 0.083 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/M | 0.2996 | likely_benign | 0.2963 | benign | 0.149 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
E/N | 0.1914 | likely_benign | 0.194 | benign | -0.094 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/P | 0.2918 | likely_benign | 0.2924 | benign | -0.063 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Q | 0.1431 | likely_benign | 0.1409 | benign | -0.052 | Destabilizing | 1.0 | D | 0.577 | neutral | N | 0.515031144 | None | None | N |
E/R | 0.2814 | likely_benign | 0.2736 | benign | 0.475 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/S | 0.1793 | likely_benign | 0.1783 | benign | -0.241 | Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
E/T | 0.1528 | likely_benign | 0.1529 | benign | -0.074 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/V | 0.1143 | likely_benign | 0.1158 | benign | -0.063 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.483036156 | None | None | N |
E/W | 0.8617 | likely_pathogenic | 0.863 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/Y | 0.5304 | ambiguous | 0.5306 | ambiguous | -0.015 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.