Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20119 | 60580;60581;60582 | chr2:178591370;178591369;178591368 | chr2:179456097;179456096;179456095 |
N2AB | 18478 | 55657;55658;55659 | chr2:178591370;178591369;178591368 | chr2:179456097;179456096;179456095 |
N2A | 17551 | 52876;52877;52878 | chr2:178591370;178591369;178591368 | chr2:179456097;179456096;179456095 |
N2B | 11054 | 33385;33386;33387 | chr2:178591370;178591369;178591368 | chr2:179456097;179456096;179456095 |
Novex-1 | 11179 | 33760;33761;33762 | chr2:178591370;178591369;178591368 | chr2:179456097;179456096;179456095 |
Novex-2 | 11246 | 33961;33962;33963 | chr2:178591370;178591369;178591368 | chr2:179456097;179456096;179456095 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.998 | D | 0.669 | 0.555 | 0.754645211913 | gnomAD-4.0.0 | 1.59219E-06 | None | None | None | None | N | None | 5.66508E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8479 | likely_pathogenic | 0.8591 | pathogenic | -2.215 | Highly Destabilizing | 0.996 | D | 0.538 | neutral | None | None | None | None | N |
I/C | 0.8838 | likely_pathogenic | 0.8916 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/D | 0.9803 | likely_pathogenic | 0.9817 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
I/E | 0.9389 | likely_pathogenic | 0.9427 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
I/F | 0.313 | likely_benign | 0.3484 | ambiguous | -1.308 | Destabilizing | 0.997 | D | 0.606 | neutral | D | 0.528040513 | None | None | N |
I/G | 0.9522 | likely_pathogenic | 0.9563 | pathogenic | -2.73 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
I/H | 0.9251 | likely_pathogenic | 0.9283 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
I/K | 0.8423 | likely_pathogenic | 0.8481 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/L | 0.1296 | likely_benign | 0.1369 | benign | -0.765 | Destabilizing | 0.104 | N | 0.245 | neutral | N | 0.438431656 | None | None | N |
I/M | 0.138 | likely_benign | 0.1437 | benign | -0.822 | Destabilizing | 0.997 | D | 0.633 | neutral | N | 0.490851479 | None | None | N |
I/N | 0.8413 | likely_pathogenic | 0.8513 | pathogenic | -1.71 | Destabilizing | 0.999 | D | 0.826 | deleterious | N | 0.503475232 | None | None | N |
I/P | 0.949 | likely_pathogenic | 0.9525 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/Q | 0.8812 | likely_pathogenic | 0.8847 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
I/R | 0.8094 | likely_pathogenic | 0.8167 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/S | 0.9063 | likely_pathogenic | 0.9131 | pathogenic | -2.53 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.516957905 | None | None | N |
I/T | 0.8707 | likely_pathogenic | 0.8796 | pathogenic | -2.185 | Highly Destabilizing | 0.998 | D | 0.669 | neutral | D | 0.532273775 | None | None | N |
I/V | 0.1398 | likely_benign | 0.1404 | benign | -1.224 | Destabilizing | 0.889 | D | 0.405 | neutral | N | 0.458100426 | None | None | N |
I/W | 0.9005 | likely_pathogenic | 0.9073 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
I/Y | 0.7625 | likely_pathogenic | 0.7836 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.