Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20123 | 60592;60593;60594 | chr2:178591358;178591357;178591356 | chr2:179456085;179456084;179456083 |
N2AB | 18482 | 55669;55670;55671 | chr2:178591358;178591357;178591356 | chr2:179456085;179456084;179456083 |
N2A | 17555 | 52888;52889;52890 | chr2:178591358;178591357;178591356 | chr2:179456085;179456084;179456083 |
N2B | 11058 | 33397;33398;33399 | chr2:178591358;178591357;178591356 | chr2:179456085;179456084;179456083 |
Novex-1 | 11183 | 33772;33773;33774 | chr2:178591358;178591357;178591356 | chr2:179456085;179456084;179456083 |
Novex-2 | 11250 | 33973;33974;33975 | chr2:178591358;178591357;178591356 | chr2:179456085;179456084;179456083 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1407608886 | 0.802 | 0.024 | N | 0.251 | 0.176 | 0.168933306366 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1407608886 | 0.802 | 0.024 | N | 0.251 | 0.176 | 0.168933306366 | gnomAD-4.0.0 | 1.36877E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99677E-07 | 1.15988E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0883 | likely_benign | 0.084 | benign | -0.054 | Destabilizing | 0.012 | N | 0.299 | neutral | N | 0.471812645 | None | None | N |
E/C | 0.5446 | ambiguous | 0.4871 | ambiguous | -0.151 | Destabilizing | 0.864 | D | 0.201 | neutral | None | None | None | None | N |
E/D | 0.0575 | likely_benign | 0.0526 | benign | -0.244 | Destabilizing | None | N | 0.101 | neutral | N | 0.449415787 | None | None | N |
E/F | 0.4807 | ambiguous | 0.4568 | ambiguous | -0.137 | Destabilizing | 0.12 | N | 0.298 | neutral | None | None | None | None | N |
E/G | 0.071 | likely_benign | 0.0675 | benign | -0.158 | Destabilizing | None | N | 0.15 | neutral | N | 0.394485224 | None | None | N |
E/H | 0.2326 | likely_benign | 0.2087 | benign | 0.444 | Stabilizing | 0.356 | N | 0.241 | neutral | None | None | None | None | N |
E/I | 0.1932 | likely_benign | 0.1804 | benign | 0.158 | Stabilizing | 0.356 | N | 0.286 | neutral | None | None | None | None | N |
E/K | 0.0885 | likely_benign | 0.0844 | benign | 0.377 | Stabilizing | 0.024 | N | 0.251 | neutral | N | 0.477295822 | None | None | N |
E/L | 0.2154 | likely_benign | 0.2018 | benign | 0.158 | Stabilizing | 0.072 | N | 0.307 | neutral | None | None | None | None | N |
E/M | 0.2702 | likely_benign | 0.2498 | benign | -0.006 | Destabilizing | 0.628 | D | 0.223 | neutral | None | None | None | None | N |
E/N | 0.0982 | likely_benign | 0.0854 | benign | 0.217 | Stabilizing | 0.038 | N | 0.232 | neutral | None | None | None | None | N |
E/P | 0.2276 | likely_benign | 0.2306 | benign | 0.104 | Stabilizing | 0.136 | N | 0.31 | neutral | None | None | None | None | N |
E/Q | 0.105 | likely_benign | 0.1018 | benign | 0.218 | Stabilizing | 0.055 | N | 0.265 | neutral | N | 0.498460528 | None | None | N |
E/R | 0.1577 | likely_benign | 0.1483 | benign | 0.58 | Stabilizing | 0.072 | N | 0.245 | neutral | None | None | None | None | N |
E/S | 0.0874 | likely_benign | 0.0783 | benign | 0.052 | Stabilizing | 0.016 | N | 0.282 | neutral | None | None | None | None | N |
E/T | 0.11 | likely_benign | 0.1043 | benign | 0.143 | Stabilizing | 0.072 | N | 0.299 | neutral | None | None | None | None | N |
E/V | 0.1375 | likely_benign | 0.1299 | benign | 0.104 | Stabilizing | 0.055 | N | 0.309 | neutral | N | 0.454339442 | None | None | N |
E/W | 0.6849 | likely_pathogenic | 0.6488 | pathogenic | -0.102 | Destabilizing | 0.864 | D | 0.2 | neutral | None | None | None | None | N |
E/Y | 0.3452 | ambiguous | 0.3146 | benign | 0.08 | Stabilizing | 0.001 | N | 0.219 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.